Detail


ID : Ahg911743

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|911743|Al_scaffold_0001_1997
Sequence
ATGACGACTG CGTCTTCATG TTACGCATCT CCGTTACGCG ATTTGCTAGT GGTAGCTTGC ATGTCCGGCG GCGGAGACCC ACTTGCTCTA TCCGATACTA GGACTAGCCG CCGGAGTAAA CTTCTTGAAA AATGCTCCGC CTTTCCTTCT CCCCATGGAT CCGCCGGTCT TGTGAGTTCT TGTAACAACA ATGCCTTGTC TTCCGTCTTC GAATCGAATA ACACTTACTT CAATCGAAAA CAGAGGAGAT TCAATCGAGC ATCTTGTACC TCTGGACAAG TCACGCTAGA GATGGAGAAG GAAGCAATGC CATATCCAGA ATTTGATTGC TCTGCATTTC CTACTAGAAT CGCTGGAGAA ATTAAATCCT TTTCGACCGA AGGATTGGTT GCTCTAAAAC TTTCGAAAAG AATGGACAAA TTCATGCTTT ATCTTCTTAC CGCTGGTAAG AAAGCGTTGG CTGATGGTGG AGTAACTGAG GATGTAATGG CAGAGTTAGA CAAATCCAGA TGTGGAGTTT TGATTGGCTC AGCTATGAGA GGCATGAAGA TCTTTTATGA TGCGCTTGAA GCTTTGAAAA TCTCTTACAA GAAGATGAAT CCTTTTTGTG TACCTTTTGC GACGACAAAC ATGGGATCCG CTATGCTTGC CATAGATCTG GGATGGATGG GTCCAAACTA CTCTATTTCA ACTGCATGTG CCACTGGAAA CTTCTGTATT TTGAATGCGG CAAACCACAT TATTAGAGGT GAAGCTGATG TAATGCTCTG TGGTGGCTCT GATTCAGTTA TTATTCCAAT AGGGTTGGGA GGTTTTGTTG CTTGTCGTGC TCTTTCACAA CAGAATGACG ATCCCACCAA AGCTTCACGT CCTTGGGATA GTAATCGGGA TGGTTTCTTC ATGGGAGAGG GAGTTGGAGT TCTGCTTTTA GAAGAACTTG AGCATGCCAA GAAAAGAGGA GCAACTATAT ACGCGGAGTT CCTTGGTGGT AGTTTCACAT CTGATGCATA TCATATAACT GAACCACGTC CTGATGGTGC TGGTGTCATT CTCTGTATCG AGAAAACACT TGCTCACGCC GGGATTTCTA AGGAAGACAT AAATTACATA AATGCTCATG CTACCTCTAC ACCAGCTGGA GACCTTAAGG AGTACCAAGC CTTTGCTCAC TGTTTTGGCC AAAATCCAGA GCTAAGAATA AACTCAACAA AATCTATGAT CGGACACTTG CTGGGAGCTG CTGGGGCCGT GGAGGCTGTT GCAACCATTC AGGCAATAAA AACAGGATGG GTTCATCCAA ATATCAACCT GGAGAATCCA GACAAAGCAG TGGATACAAA GCTGCTGGTG GGTCTTAAGA AGGAGAGGCT GGATATTAAA GCAGCCTTGT CAAATTCTTT CGGGTTTGGT GGACATAACT CTAGCATCAT TTTTGCTCCT TACAAATGA
Length1449
Protein Sequence
Protein Residue
Map Locationscaffold_1: 7757805.. 7760696
Download Sequence
A.thaliana
AGI-codeAT1G74960.2
Descriptionfatty acid biosynthesis 1
TAIR curator summaryEncodes a plastidic beta-ketoacyl-ACP synthase II, involved in fatty acid elongation from 16:0-ACP to 18:0-ACP. Homozygous knock-out mutants are embryo lethal, indicating early embryo development is sensitive to elevated 16:0.
Alias[ATKAS2][FAB1][KAS2][ARABIDOPSIS BETA-KETOACYL-ACP SYNTHETASE 2][fatty acid biosynthesis 1][BETA-KETOACYL-ACP SYNTHETASE 2]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg344393 AGAMOUS-like 41
20.567 Ahg475213 serine carboxypeptidase-like 32
24.5561 Ahg951908 FAD/NAD(P)-binding oxidoreductase family protein
27.1662 Ahg896372
29.5804 Ahg495460 F-box/RNI-like/FBD-like domains-containing protein
40.7922 Ahg941337 F-box and associated interaction domains-containing protein
52.6688 Ahg888873 Pectin lyase-like superfamily protein
58.3781 Ahg471246
69.1014 Ahg935217
69.8999 Ahg952323
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression