Detail



ID : Ahg897003

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|897003|Al_scaffold_0005_969
Sequence
ATGAGATCTC AGGAGAAAAC CTCAACGGTA TCATTTAAAT CGAGTAGTAA CACACACGTA ATATTTCGGT TTGCGGATTG GGTAGATATA GTTCTTATGG TACTTGGTAC TGTGGGAGCC ATTGGAGATG GAATGTCCAC GAATGTAGCG TTAGTATTCG CAAGCAGGAT CATGAATTCT TTGGGCTACG GTCAACACAA TCCTAGTTCC ACAACTTTCA AGGAAGAGAT TCAAAAGTGC AGTTTATACT TTGTATACCT GGGATTGGCA ATCTTGGGAG TGGCATTTAT GGGTAATGTG CCCACATTCT TGATGCACAT ATCAGTTTTC ATCACTGGCC TTCTGTTTTC GGCATACTTT TCATGGAGAT TAACCGTCGT GGCCATCCCA ACACTTGTTC TTCTTTTAAT CCCAGGGTTG ATCTATGGCA AATACCTTGT TCACTTATCT AAGAAATCTT TCAAAGAACA CGCAAAAGCA AACTCCATCG TGGAACAAGC TCTAAGCTCC TTCAAGACCA TTCTTTCATT CACAGCCGAG ACTCAAATCA TCAAGAAATA CTCAGAGGTC TTGGAAAGAC ACAAAAAGCT TGGGTTAAAG CAAGGTCTCG CCAAAGGTTT AGCTGTGGGA AGCTCAGGGA TTTCATTCAC CATTTGGGCC TTTCTTGCTT GGTACGGAAG CAGATTGGTG ATGCACAAAC AAGAAACCGG TGGACGCATT TATGCAGCCG GGATCTCCTT CGTCTTGGGT GGCATCTCTC TAGGGACGGC ACTGACTGAA ATAAGATATT TTTCGGAGGC TTCAGTTGCA GCAGCTCGAA TATGTTCAAG GATTGATAGA ATTTCAGAGA TAGATGGTGA GGATACAAAG AAAGGATTCA TACCAGGAGA TAAAATGAAG GGAAGAGTAG AATTTGAGCA TGTAACTTTC ATATATCCTT GTCGACCGAA ATCAATAATT CTCAAGGATT TCACTCTTAC TGCTGATGTG GTGGCGCATA AGCTTTCAAC AGTTAGAGGA GCCAATATCA TTGCTATGTT AGAAAATGGT TCCGTTAAAG AACTAGGTTC TCATGAAGAT TTGATGACGA ATAACAACCA TTATGCAAAA CTCGTAAACC TTCAAAGACA ATGCGGTCAT GAACATCGAC AGGATCTTCA AGATAGAGTT AAAACTCCTG AGATACAACA ACGTTGGTCT ACTATGAACT GTGTCAATAG GCTAAGCAGA AGGTCATCTC CTGATCTCAT TGATTCTCCT TACCCATTGG AAAGCATTAA CACAGCCAAA ATCAATGATA ATCACCCTTC TACTTCATTC ACCCGACTTC TTCCATTGGT TTCCCCTGAG TGGAAGTCTT CTCTTGTCGG TTGCATTTCA GCTGCAACAT TTGGTGCAAT CCAACCGGTT TATGCCTTAA CCATTGGCGG TATGATCTCC GCATTTTTTG CAAAAAGCTC ACAGGAAATG CAGGCTAAGA TACGAATTTA CTCCTTAATC TTCACTTCCC TCACCTTTCT CTCCATCACC CTTAATCTCC TTCAGCATTA TAGTTTTGCA AAAATGGGTG AAAGGCTAAT GCAAAGACTT CGGTTGAAAA TGCTCGAAAA AATCTTTACC TTTGAACCTG CCTGGTTTGA TGTGGAAGAG AACTTTAGTG GTGAGCTTTG TTCAAGGCTT AGTAATGAAG TGTCCATTGT GAAGTCCTTA GTAGCCGACA GACTTTCGTT GCTTGTCCAG ACCATTTCAG GTGTCACAAT CGCAATGATT ATAGGTCTAC TACTTTCTTG GAAACTCGCG TTGGTGATGA TCGCGGTCCA GCCTCTCTCT ATCCTCTGCT TCTACACCAA AAAAGTTTTG CTCTCCAACA TTTCCCACAA TTATGCCTAT GCACAAAACC GTAGCTCACA AATTGCATCG GAAGCTATTT ACAACCACAA AATTATTACA TCCTTAGGGT CTACAAAGAA GATCATAGAA ATATTTGATA AGGCTCAATA TAAGGCGAAA AGAAAGGGTA GGAAGGCAGC ATGGCTTGCA GGCTTTGGGA TGGGGTCGGC ACAGTGCCTA ACCTTCTTGA CATGGGCATT AGACTTTTGG TATGGAGGAG TGTTGGTTCA AAAGGGGGAA ATCTCGGCCG GGGATGTATT CAAGACATTC TTTGTTTTGG TAAGCACCGG CAAGGTTATT GCGGAAGCAG GAAGCATGAC TTCTGACCTC GCCAAGGGCT CTGCCGCCAT TTCTTCCGTT TTCAAGATCC TTGACCGTCC TTCATCTCAA GAAAATACAA ACCATGGAGC AAAAATTGAG AAACTAATAG GGCGGATAGA ACTGAAGAAT ATCGATTTTT CTTACCCTAA CCAGCCTAGT ATTCCAGTGC TTCGACAATT TTCCTTGGAC ATCAAGCCCG GGACAAGCAT TGGATTGGTC GGTATATCAG GATGTGGTAA ATCAACAGTG ATAGCTTTGA TCCAACGTTT CTACGATGTG GAAATAGGTT GTGTGAAAAT AGACAGTGTA GATTTGCGAG ATATAGATAT TAAATGGTAT AGAAAACATA CTGCACTAGT GAGCCAAGAG CCAGTTGTTT ACTCTGGAAC TCTGATCATG GCTAACCGGA AGATGACAAC AGTAGTAGTG GCTCACCGCC TCAACACCTT GAAAATATTG GATTGTATTG CAATGATCGC AGATGGAACC GTAATGGAGA CAGGGAGTTA CGACCACTTG AAAAATATTG GAGGCCAGTT CTCTAGACTT GTTCATGCTC ATGATCTTAA ATCTTGA 
Length2787
Protein Sequence
Protein Residue
Map Locationscaffold_5: 6590393.. 6595980
Download Sequence
A.thaliana
AGI-codeAT3G30875.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.5357 Ahg890578 HSP20-like chaperone
17.2047 Ahg901222 homeobox-3
26.6083 Ahg940858 Integrase-type DNA-binding superfamily protein
26.8887 Ahg921700 ENTH/VHS/GAT family protein
29.189 Ahg316947 Pectin lyase-like superfamily protein
31.9374 Ahg312221 Pectin lyase-like superfamily protein
32.5115 Ahg905690
34.7131 Ahg925744
35.4401 Ahg341831
38.4187 Ahg493503 O-Glycosyl hydrolases family 17 protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression