Detail



ID : Ahg897280

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|897280|Al_scaffold_0005_1246
Sequence
ATGAAGAGAG TGATGAAATT CTTTAAGCGG AAGTCTGATC CTAAGCAAAA GCTTCGAGAT TGGCAACGAA AGCTACGTCA AGAAGTCCGT AACATTGAAC GCCAAATTCG AGATATTGAG AGAGAAGAAA GAAATGTACA TAAAGCTATC AAAGACTCGG TGAAGCGGTA TGATATGGTC ACTGCTAAGG CACTAGCTAG AGAAATAGTG AGATCGAGAA GAACGGTTAA GCGGTTATAC GAGAATAAAG CGAAGATGAA TTCAATATCA ATGCATCTTG GAGAGAGTAT TGCGATTTCG GGAACAGTTG GGCTTCTTTC GAAGAGCGGT GAGGTTATGA AGCTTGTTAA TAGTCTAATG AAAGCTCCAG ATATGGCTGT GACAATGCAG GCATTTAGCA AAGAGATGAC CAAGGCTGGG GTTATTGAAG AGTTTGTAAG TGATGCGGTT GATAATGCCT TAGATTCTGA GGATATCGAA GAGGAGATCG AGGAAGAGGT TGATAGGGTA TTGACTGCCA TAGCAGGAGA GACTGCAGCT GAGCTCCCAG AAGCAGTTAG GAAGGAAAAG ATAAATGTAC TAGCGCAAAA GGCGGGAACT TCACACGGGG AAGATGCAAT TGCACAAGGA GTTGATAATG AAGACGAACT AGAGGACATT AGAGCTCGGC TCGCCAATGT TAGATTTTGA 
Length690
Protein Sequence
Protein Residue
Map Locationscaffold_5: 11068143.. 11069660
Download Sequence
A.thaliana
AGI-codeAT3G45000.1
DescriptionSNF7 family protein
TAIR curator summary
Alias[VPS24][VPS24.2]
Gene coexpression
MR
MR Locus Description
12.8062 Ahg897485
40.5463 Ahg921700 ENTH/VHS/GAT family protein
45.2106 Ahg950935 Protein of unknown function (DUF1216)
47.5605 Ahg901222 homeobox-3
60.1997 Ahg929024 Basic-leucine zipper (bZIP) transcription factor family protein
62.0886 Ahg478320 GDSL-like Lipase/Acylhydrolase superfamily protein
66.5207 Ahg476285 Transmembrane amino acid transporter family protein
67.6609 Ahg477911 NOD26-like intrinsic protein 7;1
69.5414 Ahg474772 proline-rich protein 1
70.8661 Ahg925744
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression