Detail



ID : Ahg897836

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|897836|Al_scaffold_0005_1802
Sequence
ATGATGATCA TGGAAGAAGA AGATCAAAAC GAGTGTAATA GTGTCGGAAG CTTCTACGTG AAAGTGAACA TGGAAGGAGT TCCTATTGGA AGAAAGATCG ATCTTTTATC TCTTAATGGA TACCATGATT TGATCACAAC TCTTGACTAC ATGTTCAATG CCTCAATCCT TTACCAAAAC CTATTATATT ATGTATCGTT AAGACCAAAA CTAATGGCAA TTAAAAATTG TGAAAATAGG GCTGAAGAAG AAGAGATGTG TAGTGAGAAG AGTCACGTGC TAACGTACGC AGACAAAGAA GGTGACTGGA TGATGGTTGG AGATGTTCCA TGGGAGTAA 
Length339
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19554655.. 19555067
Download Sequence
A.thaliana
AGI-codeAT3G62100.1
Descriptionindole-3-acetic acid inducible 30
TAIR curator summaryEncodes a member of the Aux/IAA family of proteins implicated in auxin signaling. IAA30 lacks the conserved degron (domain II) found in many family members. IAA30 transcripts are induced by auxin treatment and accumulate preferentially in the quiescent center cells of the root meristem. Overexpression of IAA30 leads to defects in gravitropism, root development, root meristem maintenance, and cotyledon vascular development. Target of LEC2 and AGL15. Promotes somatyic embryogenesis.
Alias[IAA30][indole-3-acetic acid inducible 30]
Gene coexpression
MR
MR Locus Description
11.7047 Ahg923548
15.1987 Ahg889574
16.4317 Ahg925083
19.0788 Ahg931091
19.0788 Ahg930762
26.2298 Ahg943665 phytochrome-associated protein phosphatase type 2C
27.7128 Ahg355403 other RNA
30 Virus1448
31.496 Virus0490
33.4066 Ahg923945
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression