Detail


ID : Ahg898105

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|898105|Al_scaffold_0005_2071
Sequence
ATGGGAAAAC TACAAGATTG GTCTGTAACC ACTTGTCTCT TCCTTTTCTT ATTTCAAGCA TTACAAATCC GTTGCACAAG CCAAACACAT GTTCTAAGCC GTCTGAACCG CTCGAAGCGA GGGATTGGTT CGTCGGTTGA CACAAACCAC TTAAATGTGA TTCGTCGCTT AAGCGTGTCT TCGCCCCTAA ACACAAGCGG TGTTAACCAA CAAGAGCAAA GGGAGAGAGA TCTAATCGAG AATCTGCCTG GACAACCTTC AGTTAGTTTT AGACAATATG GCGGTTATGT GACCGTGAAT GAGTCAGCAG GTCGATCCTT GTACTATTAT TTCGTGGAAG CCACCGAAAA CAAAAAGTCG TCACCCCTTG TTCTATGGCT AAACGGAGGA CCTGGCTGCT CCTCCCTATA TGGGGCATTT CAAGAACTTG GCCCATTCCG CACACATAGC GACGGCAAAA CACTCTATAC CAATCCTTAT TCATGGAACA AATTGGCGAA CATATTATTT TTAGAATCTC CAGCAGGAAC GGGATTCTCG TATACGAACA CAACGACGGA TTTGGAGAAT CCCGGGGACA TGAATACAGC AGCTGATAAC TACATCTTCT TGGTGAAATG GCTGGAGAGG TTTCCGGAAT ACAAAGGAAG AGAATTTTAC ATCGCTGGTG AGAGTTACGC CGGGCACTAT GTTCCACAAC TCGCACAAAC CATCCTTGTC CATAACAAGA ACCAAACCTT CATCAACCTA CGTGGCATTT TGATTGGTAA CCCGAGTCTG GACGACACCG CCGAACTAAT GGGTGCAAAC GAGTTTTTGG TAAGCCATGC TTTACTCTCA CAAGAAACAT TCCTTAGCTT CGAGAAAAAC TGCGCCCATA ACCCTCCAAC TGGTGAGGTT GATTGCGTCG AGTTGAGTAT GAAAATCCAG GACGACATAG GAAAAATAAA CCTATACAAC ATATTAACTC CTACGTGCCT AAACCCCACG TCGAATAACC AATCCAAAGA ATGCACAACG GTGATGCAAT ATGATGCGTG CGGAATGCAG CACATAGATG CTTACTTTAA CCAGGGCGAG GTTCAGCGTT CGATGCACGT CACAAAAGTG CCATACACGT GGAAGCTATG TAATGAAGAC CTCGGATTTA ATTGGAGTCA GACCGATGCA TCTGCATCGA TGCTACCTAT TCTCAAAGAG CTGATGAAAC ATGAGCAACT GCGAGTTTGG GTGTACACTG GAGACACGGA TACAGTGATT CCGATAACGG TTACAATGTA CGCTCTGAAG ATGATGAATC TAACAGCTGT TACGGACTGG CTCCCGTGGT TTAGCGAAGG GCAGGTGGGT GGTTTCACAG AGGAATACAA AGGCAATTTT AGGTATGCCA CAGTGAAAGG AGCTGGTCAT GAAGTTCCTC TTTACAAACC TAATGTTGCT TTTACTCTCT TTAAACAGTT TTTACTTAAT TCTCCTCTCC CTCTTACCCC TTGA
Length1494
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15051859.. 15053595
Download Sequence
A.thaliana
AGI-codeAT3G52020.1
Descriptionserine carboxypeptidase-like 39
TAIR curator summary
Alias[scpl39][serine carboxypeptidase-like 39]
Gene coexpression
MR
MR Locus Description
5.47723 Ahg900378
11.4891 Ahg913044
15.0997 Ahg312489 Polyketide cyclase/dehydrase and lipid transport superfamily protein
17.3205 Ahg926261
18.0555 Ahg492113 Stigma-specific Stig1 family protein
20.7364 Ahg917658 subtilase 4.13
26.533 Ahg342312 ERD (early-responsive to dehydration stress) family protein
27.55 Ahg904679
31.6228 Ahg494580 RmlC-like cupins superfamily protein
31.7962 Ahg897446 protein kinase-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression