Detail



ID : Ahg898141

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|898141|Al_scaffold_0005_2107
Sequence
ACAAGGGAAA TTGACTGGAG CCCAAATCAT CCACACCTTG CACAAGAAAT AGCAGGGCTT GTGTTTGTAG TCGATAGCAC GGATAGAGAT CGAATAGAAG AGGCCAAATA TTTTCTTAAC ATGGTGATTG ATGAGATACA AGGGAGTGTC CCGGACAATG TGGCTGTTCT TGTATATGGA AACAAGCATC AAGTTCCTGG TGCTATGTCT GCTTCTGAGA TCAGTAACAA GCTTGATCTC ACTTCTCTTC GTACTAAAAA TTGGCAGAGA AACTGGCATG TCCAGAGCTC ATGTGCATTC TGTGGTGATG GTTTACATGA AGGACTCGAC TGGCTGTTGA AAAATGCTGA AAGAATTTAA 
Length360
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15165277.. 15166049
Download Sequence
A.thaliana
AGI-codeAT1G02430.1
DescriptionADP-ribosylation factor D1B
TAIR curator summaryA member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins.
Alias[ARFD1B][ATARFD1B][ADP-ribosylation factor D1B]
Gene coexpression
MR
MR Locus Description
3.31662 Virus1739
6.78233 Virus0061
7.54983 Ahg897044
28.5832 Ahg329467 transposable element gene
33.3467 Ahg904936 F-box family protein
34.4964 Ahg482210 galactosyltransferase 13
34.4964 Ahg923108
42.1426 Ahg942692 RING/U-box superfamily protein
42.19 Virus1926
43.2666 Ahg939010 Domain of unknown function (DUF1726) ;Putative ATPase (DUF699)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression