Detail


ID : Ahg899104

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|899104|Al_scaffold_0005_3070
Sequence
ATGTCTCTGA TCTGCCGCCT CAATCTTGGT CGGCGTTTCT CCACCGCCCT GCCAAGAAGA GCGGAGGACA TAATGTCAAA CCCAGATTGC CGTCCTACGC AGCTATGCTT GAGAGTCACG TACTTGATCA GATTCGTTGG AGATCTCGAC ACGGCGGCGA AGTACGCTCG TTTGGCTGTT TTCACCAGAT TCAAATCGGA GACCACAATA AAGACATGTC AATCCATCAT CGGAGGCATG TTGCGGGATA AAAGGCCCGA GGATGCTTAC GATCTCTTCG ATTTCTTCTT CAATGAGCAT AAGCTAATAC GCAACAGCCA TTGCTGGAAC TACATGCTCG AATCTGGTTT ACAACAAGGC GTTGTTGACG ATGCTCTCGA ATTGTACCAC CGGCCCTTCA AATTTGGTAA AGAAATCCAC GACTACCCAA ATACCGATAC TTTCAGGGTC ATGACTAAAG GGTTAGTCCA CTCCGGTCGA TTGGACGAAG CCGAAGCCGT GCTTAGAGAC AGGAAAGTCG ATAGGATCAT CTACCCAGAT CACGTGGCGT ACAACAATCT GATTCGCGGG TTTTTGGATC TTGGGAATTT AGACAAGGCG CATCTAGTCT TGGACGAATT CAAGCGCTTG TTTTTGATTG CTCTTTCCGA GACCAAAGAT GATTTGCACC ATTCAAACTA TGAAAGCAGA GTCGCATTCG TGATGGCCAC ATTCATGGAG TACTGGTTTA AGCAAGGTAA AGAGGTGGAA GCTATGGAGT GTTACAACCG TTCTGTTCTA TCAAACAGGT TACTTGTTTG TGCCGAAACG GGTAACGCCC TTTTGGTAGT CCTGCTCAAA TACGGTGAGA AAAAACATGC TTGGGCATTG TACCATGAAC TCTTAGATGA ACGTAGAACA GACTCTGATA CCATTAAGAT AATGGTGGAC GAGTGTTTTG ATATGGGTCG ACTTGGCGAG GCTATGGAGA CCTACAAGAA GGCGAGAGCC AAGAACATCT CTTTCTATTT TACTGTATTC AATGACGGAT ACATTATCAC AAGGTGTTGC GAAAACGGCA TGTTGTCAGA AGCAGAGTCT GTCTTTGTTG ATTCACTTGC TGATGATATT GGATACGTTG ATGTTAAGAC TTTTAAAACA ATGATCGATG CTTATGTGAA GGCTGGAAGA ATCGATGATG CTATAAAAAC CTCCAACAAG ATGATCGATG CAACTCTAAA GGAGGTCTCC CATCTCTTTT GA
Length1242
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19132957.. 19134246
Download Sequence
A.thaliana
AGI-codeAT3G60980.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.48528 Ahg478163 RNA-binding KH domain-containing protein
10.2956 Ahg496218 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
12.6491 Ahg341076 myb domain protein 3r-3
20.2485 Ahg473277 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
27.6586 Ahg478719 BRI1-like 3
27.6586 Ahg939182 Tetratricopeptide repeat (TPR)-like superfamily protein
28 Ahg479946 MUTL protein homolog 1
34.3511 Ahg927711 N2,N2-dimethylguanosine tRNA methyltransferase
34.641 Ahg484310
35.7911 Ahg949003 HEAT repeat-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression