Detail



ID : Ahg939182

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939182|scaffold_503373.1
Sequence
AAACTGAACC CTAAGTAGTC ATGTCCCTCC TCCGCCGCAT TGTCCGAAAT TCGACGGTAT CAAAGGCTGT CCTGGTTGCG AAGGCGTTCA AGCCTTACCC ACTCGGAAGA GATCCTTCCT CACTCCCAAA GCTTGATACG GTCTCCATCA GGGATATCGA TGACCGCCCA ATTTCTCTGC GCTACAGAGT CACGGCGATG ATCGAGATGT CTATTCTCGA CGAAGCCTCG AAGCTCTCGC GCCTCGCTGT CTTGGACAAA TTTCGAGTCG ACGGAGACAC CGTATTCATC TGCAATTCCG TAATCGGCGC CATGTGCAGC GCCAAACGGT ACGACGATGC CATCTCTCTG TTCAATTACT TTTTCAACGA GTCTCAAACT CTCCCAAACG TGCTCTCCTG CAATCTCATC ATGAAAGCAC ACTGCGACCA AGGTCACGTC GATGAAGCTC TTGAGCTCTA CCGCCACATT TTGCTCGACG GACGTTTAGT TCCAGGGATC GAGACATACA TGATACTCAC CAAAGCCTTG GTTGACGCCA AAAGATTCGA TGAAGCTTGT GATTTAGCGG GATCCATGAG CTCTTGTAGT TTCATGGTCT ACGACATTCT GATTCGCGGG TTCTTGGATA TAGGGAATTT CGTAAAGGCT AGCCAAATCT TCAAGGAATT GGAAGGACTG GATAGGAAAT TTCCATGGAG AGAGTATCAC AAGGCATTTG CAATTTTTAA TGTTTCGTTT GTGAACTATT TTTTCAAGCA AGGTAAAGAT GAGGAAGCTA TGGAGATTCT CGCAACTCTG GAAGATGCTC AAGTACTGAA ACCCATTGTC GGAAATAGGG TTTTAAAAGT TCTTGTGGAG CACGGTAAGA AAACAGAGGC CTGGGAATTG TTTGAAGAGA TGATAAAAAT CTGTGATTCC GAGACGATTG ACATAATGTC CGAGTATTTT ATTGAAAATA CTGTACCATT CGAGCGGCTC AGGACAACGT GTTATAGGAC GATGATCGCA AGTCTCTGCA AGCATGGAAG AGTGTTGGAG GCCGAGAAAT ACTTCGCAGA GATGTTTACC GACGCTGAGA TATTTACCGA CGTTGATGGA GAGGACTTGT TGGTGGGGCC TGACCTTTCA ACATTCAGAG CAATGATCAA TGGATATGTT AAGGTAGGGG CAGTCAATGA TGCTATCAAG ACTTTGAACA AGTTGCGGAT TTCAAATATT AGAAAGCTTG CTATTCATCG AGCCCCATAA GTTGCATTTG TGCTTCTTTC 
Length1270
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19130904.. 19132173
Download Sequence
A.thaliana
AGI-codeAT3G60960.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.16515 Ahg330810 crooked neck protein, putative / cell cycle protein, putative
11.6189 Ahg949517
16.9706 Ahg494047 Plant calmodulin-binding protein-related
25.6905 Ahg897788 Metal-dependent protein hydrolase
27.6586 Ahg899104 Tetratricopeptide repeat (TPR)-like superfamily protein
51.8749 Ahg928456 Galactose oxidase/kelch repeat superfamily protein
59.5147 Ahg944831
62.8649 Ahg936826 ribosomal protein L16
67.3721 Ahg480544 GLN phosphoribosyl pyrophosphate amidotransferase 1
67.5278 Ahg887877 Disease resistance protein (CC-NBS-LRR class) family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression