Detail



ID : Ahg899988

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|899988|Al_scaffold_0004_638
Sequence
ATGGGTGCGA ACGAGTTTCG TTTCTTCCTC TCCTGCGATA TCAATTCGCC CGTCACTTTT CGTGTCGAGA AGCTTGATGG AAACCTCCCC GTCAAGAAAT CTTCTGATTC GGGAGTTGTC TCCGTCGTAG AGGAGAAAAA ACCAGAGCTT TACATTGAAT GTGCATTGTA TATTGATGAA 
Length180
Protein Sequence
Protein Residue
Map Locationscaffold_4: 4096626.. 4096989
Download Sequence
A.thaliana
AGI-codeAT1G60490.1
Descriptionvacuolar protein sorting 34
TAIR curator summaryEncodes a phosphatidylinositol 3-kinase that is expressed in most plant tissues. Defects in VPS34 affect a number of cellular processes. Loss of function mutations are not transmitted through the male gametophyte due to defects in microgametogenesis therefore it is difficult to assess the effects of loss of VPS34 function in the whole plant. Involved in salt-stress responses.
Alias[ATVPS34][PI3K][VPS34][PHOSPATIDYLINOSITOL 3-KINASE][vacuolar protein sorting 34]
Gene coexpression
MR
MR Locus Description
1 Ahg911453 vacuolar protein sorting 34
7.87401 Virus2942
9.48683 Virus3111
10.3923 Virus3732
12.1244 Virus3733
13.0384 Ahg949089
14.1421 Virus1173
14.2829 Virus3066
15.8745 Virus1722
18.4391 Ahg496044 Subtilase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression