Detail



ID : Ahg911453

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|911453|Al_scaffold_0001_1707
Sequence
ATGGGTGCGA ACGAGTTTCG TTTCTTCCTC TCCTGCGATA TCAATTCGCC CGTCACTTTT CGTGTCGAGA AGCTTGATGG AAACCTCCCA GTCAAGAAAT CTTCTGATTC GGTTGTCTTC TTCTTCCTAG GGGAGAAAAA ACCAGAGCTT TACATTGAAT GTGCGTGCAT TGTATATTGA 
Length180
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6594619.. 6595541
Download Sequence
A.thaliana
AGI-codeAT1G60490.1
Descriptionvacuolar protein sorting 34
TAIR curator summaryEncodes a phosphatidylinositol 3-kinase that is expressed in most plant tissues. Defects in VPS34 affect a number of cellular processes. Loss of function mutations are not transmitted through the male gametophyte due to defects in microgametogenesis therefore it is difficult to assess the effects of loss of VPS34 function in the whole plant. Involved in salt-stress responses.
Alias[ATVPS34][PI3K][VPS34][PHOSPATIDYLINOSITOL 3-KINASE][vacuolar protein sorting 34]
Gene coexpression
MR
MR Locus Description
1 Ahg899988 vacuolar protein sorting 34
3.87298 Ahg496044 Subtilase family protein
8.06226 Ahg947532 Endoplasmic reticulum vesicle transporter protein
15.5563 Virus2951
20.8806 Ahg930458
21.6333 Ahg890715 E2F/DP family winged-helix DNA-binding domain
22.9783 Ahg906029 glutamine synthetase 1.3
27.9643 Ahg355813
34.2491 Ahg948016
37.0405 Ahg314357
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression