Detail



ID : Ahg900057

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|900057|Al_scaffold_0004_707
Sequence
ATGGGGCACG CCACGACTCT CTCTCACTTC CTCATCCTCT CTTCCTCCAG GCTCTCTCGT CTCGGGTCCC GCACTAGATT CCTCGCAAAA CCCACTCCTC TCTCCGGCTC TTTTTCTCCC TTTCCGGTCA CCGGACAAGG GTTCCGATGC TGTTGCTCCG CCGCCACAGA AGACCCTTCT CCTTCTGTAA AGAGACGCGT GGTCTCTGGT GTCCAGCCTA CAGGTTCAAT TCACTTAGGA AACTATCTCG GTGCTATCAA AAATTGGGTT GCTCTTCAGG ATACATATGA AACACTCTTT ATCATCGTAG ACTGTCACGC GATAACACTA CCATATGATA CACATCAACT AGGAAAGGCA ACTACGGATA CCGCAGCACT TTATCTAGCA TGTGGTATAG ACGTTTCTAA GGCTTCGGTA TTTGTGCAAT CTCACGTCCC CGCTCATGCG CAGTTAATGT GGCTTTTATC TGCATCCACG CCTATTGGTT GGTTAAAGAA AATGACTCAA TTTAAAGAGA AATCACGCAA GGAGGGGGCT GAGGATGCTA GTGTCGCTTT GTTTACTTAT CCTGATCTGA TGACTGCTGA TATCCTCTTG TATCAGTCTG ATTTTGTCCC TGTTGGCGAG GACCAGAAGC AGCACATAGA ACTTGCCCGT GAAATCGCTC AGCGTGTGAA TCATTTATAT GGTGGAAGAA AGTGGAAGAA GCTTGGAGGG TATAGAACTT TGCGCGGTGG TTCGCTCTTT AAGATACCAG AACCACTCAT ACCACAAGCT GGAGCCCGTG TTATGTCTCT TACCGATGGT CTTTCCAAGA TGTCCAAGTC CGCACCTTCT GATCAATCCC GGATCAATCT CCTTGACTCA AAAGATCTGA TTGTCGACAA GATAAAACGG TGCAAGACAG ACTCATTTGC AGGCCTTGAA TTTGACAATG CTGAGAGACC TGAATGCAAC AATCTCCTTT CAGTATATCA GATTGTTTCG GGCAAGACAA AAGAGGAAGT GACGGAGGAA TGCAAAGATA TGAGCTGGGG TACATTTAAG CCTCTCCTTG CAGATGCTTT GATCGAACAT CTGAGTCCTA TCCAGGCCCG TTATCAGGAG ATAATAGCGG AACCAGCGTA TTTGGACAAA GTATTGTCAG AAGGTGCGGA TAGAGCGGCG GAATTAGGAG ATGTCACAAT GCGCAATATG TACCAAGCTA TGGGATTCTA TCAAAGGAGG AGATAG 
Length1236
Protein Sequence
Protein Residue
Map Locationscaffold_4: 4880418.. 4883693
Download Sequence
A.thaliana
AGI-codeAT2G25840.2
DescriptionNucleotidylyl transferase superfamily protein
TAIR curator summary
Alias[OVA4][ovule abortion 4]
Gene coexpression
MR
MR Locus Description
6.32456 Ahg937391 translocon at the outer envelope membrane of chloroplasts 75-III
17.6635 Ahg318480 Translation elongation factor EF1B/ribosomal protein S6 family protein
24.4949 Ahg483522 Dihydrodipicolinate reductase, bacterial/plant
25.4558 Ahg492111 HIS HF
28.0357 Ahg348313 RNA-binding (RRM/RBD/RNP motifs) family protein
32.4962 Ahg934855 Uroporphyrinogen decarboxylase
35.5106 Ahg945614 arginosuccinate synthase family
40.8044 Ahg328874 embryo defective 1923
42.8252 Ahg928524 elongation factor P (EF-P) family protein
44.2154 Ahg923482 Prolyl oligopeptidase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression