Detail



ID : Ahg901763

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|901763|Al_scaffold_0004_2413
Sequence
ATGGAGAATG AGACAGAATT GAGGGATGTT CATCAAGAAG AAGAACAACA ACAACGTGAA GAAGGAGAAG AAGAAGCACA GCCACAAAAC CCACCACCCT TACGACGTCG TTTCGTGATA TATCTTTACG TTGGATATTT TCTTGCAAGA TGGAGTGCCA GAACATGGGA ATTCTCTGTT GCTTTGTATA TGATCCACTG GTGGCCAAAC TCTCTGCTTC TAGCCGCGAT TTATGGTGCT ATAGAATCTG GTTCTACTGC AATTTTTGGT CCCATTGTGG GGCAATGGGT CGAGGGAATG GACTATGTTA AAGTTCTCAG ACTCTGGCTC CTGTTCCAGA ACCTCTCCTA CACTATTGCT GGTGGTGCAG TCATCAAGTT GTTGCTAGTT TCCGATCTTA AGTCCCGGAA TCTCGCGGTG TTTGCAATCT TGGTTGTGTT AACGAATGTT GCTGGCGCCA TTGGAGTTCT TTCGACTCTT GCTGGCACCA TTCTGATCGA ACGAGACTGG GCTGTGGTTA TGTCAGAAGG TCATCCACCA GCAGTATTGA CAAGAATGAA TTCTGTCATT AGGGGCATTG ATTTGAGCTC CAAGTTATTT TCTCCAGTCA TCACTGGTCT GATCATCAGT TTTGTCTCAC TTAAGGCGTC AGCGATAACT TTTGCAGCTT GGGCCACTAT AACAGCTTGG GTTGAATATT GGCTCTTCAT TTCAGTTTAT AGTGGTGTTC CTGCGATAGC ACGAAGCAAT GAGAGACGGA TCTTGCGTTC CCGGACAAAG CAAGTAGAAG GAACAGATGC ACCTGTTTCT GTATCTAATG CTCCGGGAAC AGAGGAGAGT TCTACTGGAA CCCCACCGTG TAGAACCGGA ATCCGGAAGA TTCTTAATAG AGTATCCAAG TCCTCTTTTG TTGGCGCATG GAGAATATAT TTCAATCAAG AAGTTGTACT CCCCGGGGTT TCTCTAGCTC TCTTGTTCTT CACCGTCCTC AGCTTTGGAA CATTGATGAC GGCTACATTG CAGTGGGAAG GGATACCTAC ATATATCATC GGTATAGGCA GGGGAATAAG TGCAACGGTT GGACTAACGG CTACATTAGT GTATCCGCTA ATGCAATCCC GTCTGTCAAC GCTGAGAACC GGTCTCTGGT CCTTCTGGTC TCAGTGGAGC TGCCTTTTGG TCTGCGTTGG ATCGATATGG GTTAAAAAGG ATAAAATAGC ATCTTACATG CTAATGGCTG GAGTTGCTGC TTCAAGGCTT GGCTTGTGGA TGTTTGATCT TTCCGTCATC CAACAAATGC AGGATCTTGT TTCAGAATCC GACCGTTGTG TGGTTGGAGG TGTTCAGAAC TCACTGCAAT CGGCTCTTGA CTTGATGGCA TATCTATTAG GTATCATTGT CTCCAATCCA AAGGATTTCT GGATATTGAC GTTGATCTCA TTCTCCACTG TGTCGTTAGC AGGAATGCTC TATACAATTC ATCTCTACCG GATTAGAAAC CACATTTTTC ACTTTGAGAA GATTCCTTTG TTGAACAAAT GTTTATTCAA GTTGCTCCCT TCTCGTGGAA ACATGTAA 
Length1578
Protein Sequence
Protein Residue
Map Locationscaffold_4: 17722556.. 17724945
Download Sequence
A.thaliana
AGI-codeAT2G38460.1
Descriptioniron regulated 1
TAIR curator summaryEncodes IRON REGULATED1 (IREG1/FPN1), one of the Arabidopsis orthologs (AT2G38460/IREG1/FPN1 and AT5G03570/IREG2/FPN2) the iron efflux transporter ferroportin (FPN) identified in animals.
Alias[ATIREG1][FPN1][IREG1][ARABIDOPSIS THALIANA IRON-REGULATED PROTEIN 1][FERROPORTIN 1][iron regulated 1]
Gene coexpression
MR
MR Locus Description
12.6491 Ahg490432 nodulin MtN21 /EamA-like transporter family protein
35.0999 Ahg892263 RAB GTPase homolog C2A
43.6807 Ahg489770 Drug/metabolite transporter superfamily protein
48.5283 Ahg329750 trehalose phosphatase/synthase 5
57.9396 Ahg950055 polygalacturonase inhibiting protein 2
58.0345 Ahg480913 GCR2-like 2
61.3188 Ahg908303 lectin protein kinase family protein
61.3351 Ahg312617 cytochrome P450, family 79, subfamily F, polypeptide 2
66.5883 Ahg492401 phosphoglucan, water dikinase
67.4537 Ahg471741 aspartate-glutamate racemase family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression