Detail



ID : Ahg902199

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|902199|Al_scaffold_0004_2849
Sequence
ATGTCGATCT CCGCTCAAAA TCCGGATATT TTCGGCGATA GACAATCCGG TCAAGATGAT TGTACTCAGG AAGTGATGGC TTGCCAAGAT GTTTCAAATA TTGCTAAGAC CTCACTCGGT CCTGTCGGAC TCGATCGGAT GGGTGCGGAT GATATTGGTG ACGAGACCAT TGAAACTGAC GGTGCTACTA TTCTTAGGAT GTTGGAGGTC GAACAGCCAG CTGCCAGTGT ATTTGATAGA ATAAGAGATC AAGCGACAGC TTGGCATGCT GCTGCTTCAA AAAATTTTAA GACCTCACTT GGTCCCGTCG GACTCGATCG GATGCTTTAT GACCTGCAGA TTCGTCAGGC AGAAGTTTTT AAATCTAATG ACTGA 
Length375
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT3G20050.1
DescriptionT-complex protein 1 alpha subunit
TAIR curator summaryEncodes a putative cytoplasmic chaperonin that is similar to mouse Tcp-1 (t complex polypeptide 1).
Alias[ATTCP-1][TCP-1][T-complex protein 1 alpha subunit]
Gene coexpression
MR
MR Locus Description
5.47723 Ahg485028 methyl-CPG-binding domain protein 5
11.225 Ahg480733 syntaxin of plants 112
18.6548 Ahg482852 Pentatricopeptide repeat (PPR) superfamily protein
35.0999 Ahg475064 Cornichon family protein
38.6135 Ahg944731 ascorbate peroxidase 6
38.7427 Ahg949357 Galactose oxidase/kelch repeat superfamily protein
41.1704 Ahg471666 RING/FYVE/PHD zinc finger superfamily protein
45.1774 Ahg934940 phosphatidylinositol- 4-phosphate 5-kinase 5
46.0869 Ahg494789 Pentatricopeptide repeat (PPR) superfamily protein
51.8749 Ahg486057 Sodium Bile acid symporter family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression