Detail



ID : Ahg482852

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482852|fgenesh2_kg.4__1912__AT2G38420.1
Sequence
TCATGGCACC GAATGTCAAA TTTCATGAGA AAGTATCGAA AAATTCCTCA GTCATCTTTC AAAACCAAAT GGAATGAGAA TCTCAAGCAA AAATACGCCA TGGAAGAGCT AAGAAGCAAT CTTCTCGCAG ATTCAGAGAA TGGTTCTGTT ATGCGAACCC TCGTAAGCTC TTTCCAACTA CATAACTGCG AGCCCACTCC TCAAGCTTAC AGATTCGTTA TCAAAACCCT AGCTAAAACC TCTCAGCTTG AGAACATTGC ATCTGTTCTT GACCACCTTG AAGTCTCTGA GAAGTTCGAC ACACCTGAAT CCATTTTCAG GGATGTCATC GCTGCTTATG GCTTCTCCGG TAGAATTGAA GAGGCTATTG ATGTTTTCTT CAAAATCCCT AATTTCAGGT GCGTGCCTTC TGCTTACACG CTCAATGCTT TGCTCTTAGT TCTTGTGAGA AAAAGACAGA GTCTTGAATT GGTGCCTGAG ATTTTAGTGA AAGCTAGTAG AATGGGTGTT AGGTTAGAGG AATCTACTTT CGGGATATTG ATCAATGCTC TTTGTAGAAT CGGTGAGGTT GATTGTGCTA CTGAGTTAGT GAGATACATG AGTCAGGATA GTGTTATTGT TGATCCAAGA TTATACTCTC TGTTGTTGAG TTCTGTTTGT AAACACAAGG ATTCGTCATG TTTTGATGTC ATTGGATATT TGGAAGATCT GCGGAAGACT CGGTTTTCGC CAGGTTTGCG GGATTATACA GTTGTGATGA GGTTCTTGGT GGAAGGAGGA AGGGGAAAAG AAGTTGTAAG TGTACTGAAT CAGATGAAAT GTGACAGAGT AGATCCCGAT GTTGTTTGTT ATACTATTGT GTTGCAAGGC GTTATTGCAG ATGAGGATTA CCCGAAAGCA GACAAGTTGT TTGATGAGTT ACTCTTGTTA GGTTTGGATC CTGATGTTTA TACCTATAAT GTGTATATCA ATGGGTTATG CAAGCAGAAC GATATCGAAG GCGCTATTAA GATGATGTCT TCAATGAACA AGCTAGGTTC TGAGCCTAAT GTAGTTACAT ACAATGTAGT GATAAAAGGA TTGGTTAAAG CTGGAGATCT TAGTCGAGCT AAGACTCTAT GGAAAGAGAT GGAGATGAAT GGAGTTAACC GGAACAGCCA CACATATGAT ATTATGATTA GTGCATATAT TGAGGTAGAC GAGATTGTTT GTGCTCAAGG TTTATTGGAA GAAGCATTTA ACATGAACTT GTTTGTTAAG AGTTCAAGAA TTGAGGAAGT CATTAGCAGG TTATGTGAGA AAGGTTTGAT GGATAAAGCA GTCGAACTTT TAGCACACCT GGTTTAAGCA ATGTGGAGCA ACTCTAAAAG TTGTAAAATT GATGTGTTTG GTCTTATTAA TGATAGTTAG AAC 
Length1413
Protein Sequence
Protein Residue
Map Locationscaffold_4: 17706169.. 17707579
Download Sequence
A.thaliana
AGI-codeAT2G38420.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.83095 Ahg908546 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein
13.6748 Ahg947406 Pentatricopeptide repeat (PPR-like) superfamily protein
18.6548 Ahg902199 T-complex protein 1 alpha subunit
20.6882 Ahg350155 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein
38.3275 Ahg495249
39.6106 Ahg481505
40.2492 Ahg355947 Tetratricopeptide repeat (TPR)-like superfamily protein
47.7493 Ahg947352 Exostosin family protein
52.0192 Ahg492683 Pentatricopeptide repeat (PPR) superfamily protein
57.3062 Ahg925161 RNA-binding protein 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression