Detail



ID : Ahg902246

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|902246|Al_scaffold_0004_2896
Sequence
ATGTGGAATT TGTGGAATCA AAAGCCGAGT TTCAGGTTTG AGATAGATAA CTTCTCGGAG AAGGAAATTG CCATGGTGTC AAAGGTATTC GTGAGTGGCG GACACGAATG GTATCTCGGC GTTTATCCGA TGGACGAAGA TTATCCTTAT GATAATTACT TGTCTGTGTA CCTGCACGCT ACAAATTCTA AACCATTGGG AAGTGGATGG CAAAGGACTG CTAATTTTTA CTTTCTTCTT TTGAATCAAT CCGACCAAGT GCTCTATAGA TCATATGTTC AAGAGCACAT AGATTTTCAT GCAGAGTCCC TGATTTGGGG TATCCAAAAG ACCTTGCCTC TTAGCTTTTT TCAGGAAGAA GGGTTTCTGG AGAACGACAA ACTCATTGTT GAAGTCTACA TTCAAATTGT AGAATCTTTT GATGGAGAGA GAGGAGATGT ATCAGAGAAG AAAGAGACTG TGGATATCAA CGGTTTTCAA GTTCTTGCTT CGCAGGTTAC TCCCACAAGG AAGATATTTG CAGAGCACCC AGACCTAGCT GTTGATTTCA AATTAAAGAA TCAAGTAGTG AGGACGGAAT ACATGAATGT CCTTCTCAAC CTCATTGAGA CACTTAACAA GCCTTCACAG GATCACTCGG AGACTGAGCT AAGCAATGCT CACAGCAAGT TGAGTGAGCT GACGGAAGCA GGCTTCAAGC TGGAATGGTT GAAGTCAAAG CTTGGTAAGG TTTCCTTGAA GAGGAAGAAA CCAGATGCTG ATGTCCAACA AATTGATGAA CGTGTTAAGA ATGAGATGAT GAAATTGGAC TTCAAGCTGG ACTGCTTGAA GACAAAGATT GAGGAGGTTT CCTTGGAGAG GAAGAAATCA GATGATGCTG ATGGTTCTCG AGTCAAAGAA ATGGAGGGAC GCATCAAGAA TCTTGAGATG ATGGTGTCAG ATCTCAAAGC TAAACTGGGA AAAGAGAAGG CCATATCTTC TGATGATGGT ATATCGACCT TTATCCGAAG GGAAATAGTC TTTGTCATGA TCACTTGTCG TTGTACCTTT GAACAGCACA CATTTCAGAC AAATTCCATG AGCTGGGGTT TTAGAAAGAC CTTGCCTCGT AGCAAGTTTA AGAAAAAAAG GTTTTTGGAG AATGACAGAC TCATCGTTGA AGTCTACATT CAAATTGTAG AAACTTTTGA TGGAGAAAGA GGAGATGTAT TAGAGAAGAA GGAAACTGTG GACATCAACG GTTTTCAAGT TCTTGCTTCT CAGATTACTC CGGCAAGGAA GCTATTCGCT GTGCACCCAG ACCTCGCAGA TGATTTCAAA CCAAAGAACC AAGTAGTGAG GACGGAATAC ATGAATGTCC TTCTCAACCT CATTGAGACA CTTAACAAGC CTTCACAGGA TCACTCAGAG ACTGAGCTAA GCAATGCTCA CAGCAAGTTG AGTGAGCTGA CGGAAGCAGG CTTCAAACTG GAATGGTTGA AGTCAAAGCT TGATGAGGTT TCCTTGAAGA GGAAGAAAGC AGATGCTGAT GTCCAACAAC TCGATGAACG TCTTAAGAAT CTTGAGCAGA TGAAATTGGA CTTCAAGCTA GACTGTTTGA AGTCAAAGCT TGAGGAGGTT TCCTTGGAGA GGAAGAAATC AGATGATGTT GATGGTTCTC GAGTCAAAGA AATGGAAGGA CGCATCAAGA ATCTTGAGAT GATGGTGTCA GATCTCAAAG TTAAAATGGA CAAGGAGGAG GCCAAATCTT TTGCTGATGG TTTTTTGTTG ATCGACGAGG TTGATTGA 
Length1788
Protein Sequence
Protein Residue
Map Locationscaffold_4: 19728002.. 19739598
Download Sequence
A.thaliana
AGI-codeAT2G42480.1
DescriptionTRAF-like family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.48074 Ahg485183 Plant thionin family protein
14.5945 Ahg473796 F-box family protein with a domain of unknown function (DUF295)
19.1311 Ahg922613
19.1311 Ahg321478 Fatty acid hydroxylase superfamily
20.4939 Ahg938557
24.4131 Ahg894664
27.2029 Ahg894592
27.8209 Ahg916020
29.4958 Ahg334870 Transducin/WD40 repeat-like superfamily protein
29.6985 Ahg932542 RNI-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression