| Annotation |
|---|
| Description | jgi|Araly1|334870|fgenesh1_pg.C_scaffold_1001435 |
| Sequence |
ATGTCTACTT CCGGTGATCA AGCCACCGCG AACAACACTA ACCCTAACAA CTCCTACGAG ATTACTCCAC CAGCCACCGA CTCTATCTCA AGCTTAAGTT TTAGTCCAAG AGCCGATATA CTTGTAGCAA CTTCATGGGA TTGTCAGGTG AGATGTTGGG AAATAACCCG TAGTGACGGC TCTATAGCCA GTGAACCAAA AGTATCAATG TCGCATGATA ATCCGGTTTT GTGTTCTGCT TGGAAAGATG ATGGAACCAC AGTCTTTACA GGAGGATGTG ATAAGCAGGC AAAGATGTGG CCATTATTGT CTGCTGCTCA ACCATTCACT GTTGCTATGC ACGATGCACC TATTTGCGAG ATAGCTTGGA TCCCTGGAAT GAATCTCCTT GTCACTGGAA GCTGGGATAA AACTTTGAAA TATTGGGACG CAAGACAGGC AACTCCAGCT CATACCCAAC AGCTTCCAGA CAAATGTTAT GCATTGACAG TGAAAGAATC TCTGATGGTC GTTGGGACTG GGGATAGAAA TTTACTAGTT TTCGACTTGA AAAAACCTCA GATGGAGTTC AAGAGAATTG AATCGTCACT GAAGGACCAG ACAAGGTGTC TTGCTGCATT TCCTGATCAG AAAGGGTTTT TGGTTGGTTC AATTGGGGGA AGTGTTGGTG TTCATCACAT TGATGATGCA CAAGTGAGCA AAAACTACAC TTTCAAATGC CACAGAGTAG GCAATACTAT TTGCTCTGTA AATTCTCTGA ATTTTCACCC GATACATGGC ACGTTTATCA GCACTGGCTC TGATGGTACA TTCAGTTTCT GGGATAAAGA TAGTAAAACA AGACTTAAGG CCATGTCAAG GTGCGATCAG CCGATTACTT ACAGTACGTT CAATCACGAC GGGGCATTAT TTGCGTATGC GGTAATGCAT CTATTCCTTA GCTTTGTGAC AATGCAAACA CCAGAGAAGC ACTACAATTA TGCTACAGAA ACCCCTTTTG AGTTTGTAGA TAATGTTGGT TATGATTGGA GCAAAGGTGC AGAAAATCAC AAGCCAGATA CTGCCAAGAC CAGTATATAC TTGCACCTGC CAGAGGAAGC CGATGTGAAG CCCAAGTCAA CATACAAAGT CGGCAGATTT ACTGTGAAAA AGGAGCAGAT TTGA |
| Length | 1164 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 6395820.. 6397954 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G80670.1 |
| Description | Transducin/WD40 repeat-like superfamily protein |
| TAIR curator summary | This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase |
| Alias | [RAE1][RNA export factor 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 11.4891 |
Ahg913510 | MEI2 C-terminal RRM only like 1 |
| 23.4307 |
Ahg329612 | Galactose oxidase/kelch repeat superfamily protein |
| 28.6007 |
Ahg904078 | glutaredoxin-related |
| 28.688 |
Ahg484455 | AP2/B3-like transcriptional factor family protein |
| 29.4958 |
Ahg902246 | TRAF-like family protein |
| 31.4006 |
Ahg923213 | |
| 32.4654 |
Ahg484221 | Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein |
| 41.7852 |
Ahg890292 | |
| 42.1663 |
Ahg919238 | |
| 45.8258 |
Ahg951548 | F-box family protein with a domain of unknown function (DUF295) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|