Detail



ID : Ahg906128

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|906128|Al_scaffold_0003_3256
Sequence
ATGTCAGATG GGTCCAGTAG TTTCGGAAAA ACCAACCTGA CCGGAGTTAG AATTTATCCG ACATTGAGTC GGCGACGATT CTCATCGATC GGAGTTGTGT CCCCAATTCG CGGAGATGCC CAATCTTCCT TTAGTCGCTC TTTCGTTTGC TCTCAGAATC TTGGTTTGAG CGGTGGAATC AGTGGTTTCA GTGCACCTGA AGCTCTGCCA AATGTTTGTG AAAATGCCAC TCCTTCTTCC ATCAAATCTT TCAACCAGTT GATTGAGACT TTGATTGATC GTGTTGATCT ATCTGAAGCT GAGGCTGAAT CATCTCTCGA GTTTTTGCTG AACGAGGCAC TAATTAGTGC CTTTCTGGTT CTCCTGAGAG CTAAAGGAGA GACATACGAA GAAATTGTGG GGTTGGCTAG GGCAATGATG AAGCATGCCA GGAAAGTGGA AGGATTAGTC GATGCTATGG ACATAGTTGG AACAGGTGGT GATGGAGCAA ACACAGTCAA TATATCAACT GGATCTTCAA TACTTGCTGC AGCTTGTGGT GCAAAA 
Length546
Protein Sequence
Protein Residue
Map Locationscaffold_3: 17537495.. 17538581
Download Sequence
A.thaliana
AGI-codeAT5G17990.1
Descriptiontryptophan biosynthesis 1
TAIR curator summaryEncodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate.
Alias[pat1][TRP1][PHOSPHORIBOSYLANTHRANILATE TRANSFERASE 1][tryptophan biosynthesis 1]
Gene coexpression
MR
MR Locus Description
16.5831 Ahg940321
16.5831 Virus0279
16.9706 Ahg897299
17.5214 Ahg948843
21.6795 Ahg907971
26.1534 Ahg895424
33.6749 Ahg338787 RWP-RK domain-containing protein
33.6749 Virus0508
38.4708 Ahg938264
38.6652 Virus2150
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression