Detail



ID : Ahg907496

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|907496|Al_scaffold_0002_577
Sequence
TGGAAAGTAC TACTTACTTC ACGCAACGAG AGAGTAGCCT TACATGCAGA TCCAACATGT GCCGCTTTTA AACCAAAGTG CCTAACAATT GAAAACAGTT GGATACTTTT CCGAAGGATA GCATTTCCTA TAAAAGACGA CACAACATTT AAGGTTAATG TAGAAATGGA AGAGATGGGT GAGCAGATGA TCAAACATTG TGGAGGTCTA CCATTGGCTG TTAAGGTGTT AGGTGGGTTG TTAGCTGCGC AATGCACATT TCATGAGTGG AAAAGGATAA ATGAGAATAT TAGAGCTCAC ATCGTTGGAG GGACTACCTT CAATGACATA AATATCAGTT CAGTTTATCA TGTTCTAAAT CTGAGTTTTG AAGAGCTGCC TGTTTATTTG AAGCACTGCT TCCTCTACCT TGCCCATTTT CCAGAAGATT ATGTGATAGA TGTGGGGAAT TTGTCCTATT ATTGGGCTGG AGAAGGAATA CAAAGACCGA GGTATTATGA TGGAGCAACC ATTCGAGAGG TCGCAGATGA ATACGTAAAA GAATTGGTCA AGAGAAACAT GGTCATTGCT AATATAGACG CTAGAACTTC AAGATTTGAA ACATGTCACT TGCATGATAT GATGAGAGAA GTTTGTCTGC TTAAAGCTGA GGAAGAGAAT TTTGTACATA TTGTTGATAA ACGCCTACCT ACAAAGTCTC AATCTCCTTG TAAATCTCGC AGAATTGCAG TACACCAGCT TGATGAAACA TATCATCCTA AGGGGGAGAT GAATCCAAAA CTTAGATCTC TCTTGTTTTT CAGCTTGGTA GAAGGTTGGA TGCCATCAGA TTTATTGTTT ACAAGGTTAC AGTTGTTGAG GGCATTAGAT CTCTCAAGAA CTCAGTTTGA AGGAGGGAAG TTACCCTCTA GTATTGGGAA GCTCATCCAC TTGAGATATT TGAGTTTATA CCAGGCACAT GTAACTCATC TACCTTCCTC CATGTGGAAC CTGAAGAAGC TGCTCTATTT AAACCTATGT GTAGGTGCGA TATCTCCAAT CTACATGCCC AATTTTTTGA AAGAGATGCG AGAATTGACA TACCTCTCTT TTCCGTTTCT GATACATGAT AAGGTAAAGA TGGAACTAGG GAATCTAGTC AACCTGGAGA CATTGGAGAA TTTCTCAACA GAGCATGTGA GAGTCAGGGA CCTCCAGAGT ATGACACGAC TCAGAGCCCT CTCTATCTGT ATCAGAGGCG GGTGTACCGT GAAAACTCTA TCTTCATCTT TACGTGATTT GAGACACTTA GAAAATCTTA CTATTTATGA TTTCCATGTG CTTGCTCCCA CTAAAGATGA AGAAGGATTT TTTTTATATT CCGTTCATCT CCAACACCTA AACTTGACAC TATATATGCC AAGGTTACCT GATGAGCAAT ATTTCCCTTC TCACCTTACA ACCATATCTC TTTGTGAATG TCGTTTGGTG GAGGATCCAA TGCCAATTCT AGAGAAGCTG CTTAACTTAT ATGATGTCAG TTTATTTAGT CAATCTTTCT GTGGGAGGAG AATGGTTTGC TCGGGCGGTG GGTTTCCTCG GTTGCAGAAC CTAATGATAT GTGGAATAGA AGAGTGGGAA GAGTGGATAG TAGAAGAAGG CTCCATGCCA CTTCTTCATT TTTTGTTTAT TAGTTGTTGT CCAAAGTTTA AGGAACTTCC TGATGGTCTG AGATTTATCA CTTCCTTGCA AGAGCGGAAT ATTGACACAA GTTTGAAGGA GAAATTGTCC AGAGGAGGAG AAGAATACTA CAAAGTCCAG CACATTCCTC TTGTTCGATT TCAATAA 
Length1827
Protein Sequence
Protein Residue
Map Locationscaffold_2: 3289656.. 3291601
Download Sequence
A.thaliana
AGI-codeAT1G59620.1
DescriptionDisease resistance protein (CC-NBS-LRR class) family
TAIR curator summaryEncodes CW9.
Alias[CW9]
Gene coexpression
MR
MR Locus Description
35.2136 Ahg474976 Disease resistance protein (TIR-NBS-LRR class) family
36.7696 Ahg474175 hexokinase-like 1
38.3275 Ahg494346 disease resistance protein (TIR-NBS-LRR class) family
40.1746 Ahg934879 Protein kinase family protein with ARM repeat domain
44.3621 Ahg932461 chorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase, putative
60.8441 Ahg323163
77.2981 Ahg933139 Leucine-rich repeat protein kinase family protein
88.3176 Ahg336505 leucine-rich repeat transmembrane protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression