Detail



ID : Ahg908588

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|908588|Al_scaffold_0002_1669
Sequence
ATGGGCTTGG GCCGAATCTA CAAAAGTCCA ATCCAGTTAC AAAAAAGGAA ATCGGCAATT CACCGGAAAA ACAAAAGAGG TTCGCCGTTT GTTGATAGAT GCCCGCAGAG CAACCGGAAC CTGAAATCCG GCGGGCTCAA GATCCACTGT TTTGTGGCTA CAACCGAAGA CCGTGAAATT TCGGCGAAAG AGACCGGTTT CCGCCATCCA TTACATGCCT CCGACGAACC AGCCCACCAC AAGTCTCCCG GAAAGCTAGT CACTCCGACT AAGCACATCG ACGGCATCAG ATCCTGA 
Length297
Protein Sequence
Protein Residue
Map Locationscaffold_2: 13345085.. 13345381
Download Sequence
A.thaliana
AGI-codeAT3G31442.1
Descriptiontransposable element gene
TAIR curator summaryMember of Sadhu non-coding retrotransposon family
Alias[SADHU7-2][sadhu non-coding retrotransposon 7-2]
Gene coexpression
MR
MR Locus Description
7.14143 Ahg945462
13.0384 Ahg944630
13.0384 Ahg944637
15.0997 Ahg942130 Leucine-rich repeat (LRR) family protein
16.3707 Ahg312221 Pectin lyase-like superfamily protein
17.3205 Ahg338077
23.5584 Ahg335836 EF hand calcium-binding protein family
24.3926 Ahg319461 F-box family protein
25.923 Ahg470227
27.6406 Ahg940152 RING/U-box superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression