Detail



ID : Ahg908956

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|908956|Al_scaffold_0002_2037
Sequence
ATGATCATGT GCAGCCGAGG CCATTGGAGA CCAGCTGAAG ACGAGAAGCT CAAGGATCTT GTCGAACAAT ACGGTCCTCA TAATTGGAAC GCCATAGCTC TCAAGCTCCC TGGTCGATCT GGTAAGAGTT GTAGATTGAG GTGGTTTAAT CAATTGGATC CAAGGATAAA CCGAAACCCT TTCACGGAAG AAGAAGAAGA AAGACTTTTA GCGGCTCATC GGATCCATGG GAACAGATGG TCCATCATCG CAAGGCTTTT CCCTGGAAGA ACTGATAACG CCGTCAAGAA CCATTGGCAC GTCATCATGG CTCGTCGCAC ACGTCAAACC TCTAAGCCTC GTCTTCTACC CTCGACGACT TCGTCTTCTT CTTTAATGGC GAGTGAACAA ATCATGATGA GTTCTGGTGG TTATGATCGT AATTATAGTT CCGGTGATAG GAAGAAAATA TTACCAGCAG ACGTTATAAA TTTCCCTTAC CAGTTCTCTC ATATCAATCA TCTTCAGTTC CTAAAGGAGT TTTTCACCGG AAAGATCGCT TTAAATCACA AAGCAAACGA GAGTAAAAAG CCTATGGAGT TCTACAATTT TCTACAAGTA AACACGGATT CAAACAAGCG CGAGACTATA GATCAAGATT CGGGTCAAAG CAAACCCAGT AACTCGGGCA CCAAAAATGA AAGTCATGTT CCCTTCTTCG ACTTTTTGTC TGTTGGAAAC TCTGCCTCCT AG 
Length732
Protein Sequence
Protein Residue
Map Locationscaffold_2: 14899457.. 14900646
Download Sequence
A.thaliana
AGI-codeAT1G73410.1
Descriptionmyb domain protein 54
TAIR curator summaryEncodes a putative transcription factor that is a member of the R2R3-MYB family.
Alias[ATMYB54][MYB54][ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 54][myb domain protein 54]
Gene coexpression
MR
MR Locus Description
7.68115 Ahg930204 UDP-Glycosyltransferase superfamily protein
10.9545 Ahg327627 expansin A17
19.8997 Ahg492606 SAUR-like auxin-responsive protein family
24.3926 Ahg470551 Protein of unknown function (DUF1264)
29.2916 Ahg923379
31.3688 Ahg346783 F-box associated ubiquitination effector family protein
37.9473 Ahg918637 Protein kinase superfamily protein
39.3446 Ahg940144
42 Ahg491863 Phosphorylase superfamily protein
48.4355 Ahg916302
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression