Detail



ID : Ahg909839

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|909839|Al_scaffold_0001_93
Sequence
ATGGCGAGAA CCAAGCATTT CGCTACCAAG TCACGATCTG AGAATCGAAC TGGGTTTTTT TTTTCCGATT TTCTGGTGTT AACCCTAGAT TTCGAATCTG AAATTGTAGA TGCCAATGCT TCATCTTCTC AAGCGGCAGG TCCGACGACG ACCCCGACAA CAAGAGGCAC TGAAGGTGGA GATAATACTC AACAAACAAA TCCTACAACT TCACCAGCTA CTGGTGGAAG GAATAAGCCT TATCGATACA AGCCAGGAAC CGTTGCTCTG AGAGAGATTC GACATTTCCA GAAGCAGACA AACCTTCTTA TTCCAGCTGC TAGCTTCATA AGACAAGTGA GAAGTATAAC TCATGCGTTG GCCCCTCCCC AAATCAATCG TTGGACAGCT GAAGCTCTTG TGGCTCTTCA AGAGGCTGCA GAAGATTACT TGGTTGGATT GTTCTCAGAT TCAATGCTCT GTGCTATCCA TGCAAGACGT GTTACTCTAA TGAGAAAAGA CTTTGAGCTT GCACGCCGGC TTGGAGGAAA AGGCAGACCA TGGTGA 
Length546
Protein Sequence
Protein Residue
Map Locationscaffold_1: 336406.. 338089
Download Sequence
A.thaliana
AGI-codeAT1G01370.1
DescriptionHistone superfamily protein
TAIR curator summaryEncodes a centromere-identifying protein histone H3 variant. Localized at centromeres in both mitotic and meiotic cells.
Alias[CENH3][HTR12][CENTROMERIC HISTONE H3]
Gene coexpression
MR
MR Locus Description
21.4476 Virus0490
45.7056 Ahg485594 IQ-domain 3
60.6218 Ahg911093 20S proteasome beta subunit E1
72.1665 Ahg485999 ROP (rho of plants) guanine nucleotide exchange factor 6
77.201 Ahg906466
77.5435 Ahg311987 Protein kinase superfamily protein
82.8493 Ahg937738
99 Virus3316
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression