Detail



ID : Ahg910140

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|910140|Al_scaffold_0001_394
Sequence
ATGGAGAAGA ATGCGACGAA GATGCTCGAA GAGATCAAAT CTTCTGATTG GGAAGACTTC ACTTGTCTTG ACGTTTCCCA GTGTTTGTTG AACAAGGCAA TTCTGCCTGT CACTTCTAAA TACCTCGCTT TGGATCGGCC TGATTGCTCC CATTACTTTC TTTCTTTTGG TATTAAGGTC AGCCAATGGT GTGCTAAACA TTTAAACATG TCTGTGATGT CGATGGAGGA GTCTCAAGAG GAAGAGCATT CCAACATTTT CTTTCAGCTT CTTTTGGATT ATCTTCATTT TTCTGCCTCA AGCTTTACTG CTATTGGAAA AACTTGTTTC ATGACTGATG AGGCCTCAGC TGTTACAGTT CATAAGTTTG TTTCAGAGCA GCTGAATTTG ACAAAGGAGG TGATAATGAA TGCCAAGAAA GTTGAATCCT TTTCCTCGGA GATTTTTAAG GCTGCGCAAG TGGTAATTGA GTCTACTGTT CGTCTGTGCA AAGAACACTC TCCAGCAGTG AATCATGACG TTGAAATGAA GACTAATGGA AATTTAGGAA AGGCAAAGAT GGAGGAAGGC AACGCTGTGG GTAATTTGGT GAGCATGATA ACGCTGGGAG TTAAATCTCT GAGTGATTTG GGTATGCTTG CTGCAAGAGA TGGTGGCAAT CTTGTGGCCA TTCTTAATAC ATCTTGGAAG GGTGTGATTA CATTGCTTCA GATAGACAAG CAGACATTGG TATCTAAGGT AGATGTAGGA GAAATTATCT TAAAGCTAAT ATCACTGATC AAGAAGTCCC TGAGATTTGC TGCTGAGGCT TGGTCTTGCT CGGTGAAGGA AAACATATCT GCAACAGAAG CCCGAAGGGT CTTTCTTCCT GTGAAATTTT ATCTTATCAA TGCTGTTAAA GTTGTGGCGC TGTTTCCAAG CCAGGCGTCT ATGGTGTTCA AGGAAATTGC ACTATGCATC TTGATGATCT CTGCTTTCAA AGTTTCACTG AGCCAACAAA CTCTTGGCAA ATCTGCAGGT GAAGTAATGA CTGATCTTCT AGAGAAAACA ACTGTAGATC TTCTAGGTGC ACTGTTAAAT GCAGCTGAAC TAACACAGGA ATTCAGGCTC ACACTTCTTG ATTCATTGTT CGTTGATGAA CAAGGTTTCT CAAACCAAAT TTGTAAGAAA CAGAGCCATG ATTCTCACAC AAAAACATCA TTGGTGGATA TCTTGTCTTT ATCTGTTGAA TCTGCGACAA GTGCCAGAGA TTTGCTCCTG GCCCGAGTTA TATTGTTCCA ATCTGTCATG AGGTATTCTT CCGAGCTTGA CAAAGATGCA AAGCTTGCAA TCACCACAAA GCTGCAATGG TTTCTCGACA TATTAGCGGA CAAAGAGATT TATTCTTCAG TCCTTTCCTC TCAGCTACCA ATGGCAGATG GTTCTGGGAA GATAATAATC TGGGAATCAA TGTATTTAGC TCTGCTTCTG TCTTTCAAAA CCCTTGTGAT CATACTCTCT TCAACTCCTG CCTGGGAAGA GCTTGAAACA TTCATACTCC AGAATCTCTT GCATCCTCAC TTCTTGTGTT GGCAGATAGT CATGGAACTC TGGTGCTTCT GGGTTCGCCA TGCCACTGAG GATTTGGTGG TCGATATGAT TAATCAACTT TGTACATTCA TGATGTCAAT GCCATCATCA GAAACACCGC TTTGCCCAGA TTCCATGCTC AGAAGAACTA CAAAGTCCAT CTGCTTTCTT CTTACCCACA GCCCCAAATC TTTAACAGTT CAAGTTTACA AAAATATTTC CACTGAGAGC AGATCTGACT CTGCACCAGG TGTATATCTA GCATTGCTGT TAGACGGGTT TCCGCTAAAT TTTCTTCCAG ACAGAATCAA AAACGACGCA AAGAGACAGA TATTTGCAGA TTTCTTCAAC TTCATCGAGA AATTTATTGA GAAACCATCA TATTCCTCCA GAGACACTGT GCTTGGAGCT CCAGTTTTCA CACTCTCTGC TTGCCTTCGG ATACTAAAGA CGAGCATATC AGAGATTGAT GCCAAAACTC TGAACTTTGT CGTCGCTCTC ATTCAAAAGT ACAGAAACTC CAAAGATGAA ACGACCAAGG ATCGTTACAG TGAGATTCTC AGCGAAACAC TATCAATCAT CTCAAGAAGC GATCAGCTAT ACACTTGCCA AGAGATGGAT AATGTCATAA CAGAGCTTCA AAAGCTATTC ATTTCAGAAA CTGATCATCA TCATAATCAT CTCCGTAAGT CCAAGCCAAA CCTTGCTCTC TTCTTGTCAG GACTCAGCAA ATACGAGATG TCTGAAACCG AAACGTGTCC AAAGAGCCGT GCGGTTTGGG AACTCTACCA TTTGCTTCTC AAGAAACGCC ACTGGGCTTT GGTACACCAT GCGGTTACTG CGTTTGGATA CTTCTGTGCA CGTACAAGCT GTAATCAGCT ATGGAGATTC GTACCTGAAG ACGCAGCTCT AGCCTTCGAT ATACCTTCTG GAAAAGAAGC TAAAACAGAG CGGTTCATGT CGGAACTAAA GATGTTTTTG GAGAAAGAAC AAGCGCTTCT CTCAATCACA CCTTCAGAAG AGGAACTCAA GTTACTTGCG AAAGAAGGCA CCAAGGTTAA GGCAACAGTG CAGAAGCTTC TAGAAGGAAG AAGCCAGAGG TCAATGGAAG TAGAGAAACG ACCAAACAAG AAAAGGAAAC TTCCAGAAGG AATTTGCAGA GGAATGGAGT TATTGCAGAA TGGAGTGAAG AGGATTAAGG AAGGTTTAAG CGAATTGAGG TCAGATGAAA ATGAGAGTGA AGAGTTTCAA AAGAGTTTAC TGAATCAGTT TTCGTGTCTT GAAGATTTAG TCTCTCATTT GTTAAGCCTC ACCGCAGCTT CGGACTAA 
Length2898
Protein Sequence
Protein Residue
Map Locationscaffold_1: 1475708.. 1479703
Download Sequence
A.thaliana
AGI-codeAT1G04650.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
23.2809 Ahg932031 Pentatricopeptide repeat (PPR-like) superfamily protein
29.0345 Ahg908084 Zinc finger (C3HC4-type RING finger) family protein
61.6928 Ahg496418 structural maintenance of chromosomes 2
61.9355 Ahg491668 Transducin/WD40 repeat-like superfamily protein
65.4828 Ahg949849
70.1783 Ahg475864 DNA polymerase alpha 2
70.2068 Ahg331123 Maf-like protein
78.8923 Ahg313236 Plant protein of unknown function (DUF936)
92.693 Ahg485479 Tetratricopeptide repeat (TPR)-like superfamily protein
98.0612 Ahg335256 ATP binding microtubule motor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression