| Annotation |
|---|
| Description | jgi|Araly1|911072|Al_scaffold_0001_1326 |
| Sequence |
ATGAACGGCG ACGGTGTTTG GCTTGACGGC GCCGGTGAAT CTCCGGAGGT TAATAACGGT GAAGCTGCGT CGTGGGTCAG AAACCCAGAT GAGGATTGGT TCAATAACCC ACCACCACCA CAACAAATCC TCCACAGTAA CCAAAATGAC TTCAGATTCA ATGGTGGGTT TCCATTAAAC CCCTCAGAGA ATCTGCTTCT TCTTCTTCAG CAATCGATTG ATTCGTCTTG TTCTGCTCCG TTACATCCTT TCACACTCGA CGCTGCTTCA CAACAACAAC AACAACAACA AGAACAGTCT TTCTTAGCTA CAAAAGCTTG CATAGCTTCT CTTCTCAATG TCCCAACCAG CAATATCAAC ACTTTCGATG AATTCGGCTT TGATTCTGGG TTTTTGAGTC AACAATTCCA TGGAAATCAA TCTCCAAACT CGATGAATTT CGCTGGATTG AACCACCAGG GACCGGATTT TCTCACTTCC CGGTCAATTC CAGCGCCGGA AAACAGCTCA GGATCATGTG GATTGAGTCC TCTGTTCGAG AACAGAACAA AGGTTCTGAA GCCATTAGAG GTGTTGGCTT CATCTGGCTC GCAGCCAACT TTGTTTCAGA AACGAGCTGC AATGCGTCAG AGTTCGAGTA GCAAAATGTG CAATTCAGAG AGTTCTTCTG AAATGAGGAA ATCGAGCTAC GAGAGAGAGA TTGACGATAC GAGTACCGGA ATCATCGATA TCTCTGGATT GAACTACGAA TCTGATGAGC ATATTAATAA TAAAGGTAAG AAGAAAGGAA TGCCTGCAAA GAATCTAATG GCTGAGAGAA GAAGAAGGAA GAAGCTTAAT GATAGGCTTT ACATGCTTAG ATCAGTTGTT CCCAAGATCA GCAAAATGGA TAGAGCAGCA ATACTTGGAG ATGCTATTGA TTACCTCAAA GAGCTCTTAC AGAGAATCAA CGATCTTCAT ACCGAACTAG AGTCTACTCC ACCGAGTTCT TCAAGCTTGC ACCCGTTAAC ACCGACTCCA CAAACGCTAT CTTACCGTGT TAAGGAAGAG TTGTGTCCAT CTTCCTCCTT GCCAAGCCCT AAAGGCCAGC AACCGAGAGT TGAGGTTAGA TTAAGGGAAG GAAAGGCAGT GAACATTCAC ATGTTCTGTG GACGTAGACC AGGTCTTTTG CTTTCCACCA TGAGAGCTTT GGATAACTTA GGATTGGATG TTCAACAAGC TGTGATTAGC TGTTTCAACG GTTTTGCTTT GGATGTTTTC CGCGCTGAGC AATGCCAAGA AGACCATGAC GTGTTGCCTG AACAAATCAA AGCAGTGCTT TTAGACACAG CAGGTTACGC TGGTTTGGTT TGA |
| Length | 1353 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 5089626.. 5091285 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G12860.1 |
| Description | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| TAIR curator summary | Encodes ICE2 (Inducer of CBF Expression 2), a transcription factor of the bHLH family that participates in the response to deep freezing through the cold acclimation-dependent pathway. Overexpression of ICE2 results in increased tolerance to deep freezing stress after cold acclimation. |
| Alias | [ICE2][SCRM2][INDUCER OF CBF EXPRESSION 2][SCREAM 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 20.199 |
Ahg472662 | MLP-like protein 423 |
| 26.4953 |
Ahg491249 | Leucine-rich repeat protein kinase family protein |
| 29.6648 |
Ahg481491 | Leucine-rich receptor-like protein kinase family protein |
| 29.9666 |
Ahg480193 | O-Glycosyl hydrolases family 17 protein |
| 37.8814 |
Ahg477690 | Li-tolerant lipase 1 |
| 48.0625 |
Ahg487523 | Eukaryotic aspartyl protease family protein |
| 49.2037 |
Ahg926666 | Glucose-methanol-choline (GMC) oxidoreductase family protein |
| 50.9117 |
Ahg495631 | SHV3-like 1 |
| 51.1664 |
Ahg914843 | Protein kinase superfamily protein |
| 51.672 |
Ahg485285 | IQ-domain 21 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|