Detail



ID : Ahg911407

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|911407|Al_scaffold_0001_1661
Sequence
ATGTACAAAT CCCAATACAT TAGCGGCCAG AGAGAAAAAT TCGTTAGGTT AGATGATATA GATTCAAGTT CTTCTCCTGC GACTGGAATG ATGATGCAGC GAAACTGTTT CGGATTTAAC CTAAAGAACC GAGGAGGTGA AAAGAAGAAA GCATCCAAAT CTTTCAGGGA AGGAGTCAAA AAAATCAGAT CAGAAGGTCT AATAACCATC GGTAAATCGG TAACAAGAGC AGTTTTTCCA GAAGATTTAA GAATAACCGA GAAGAAAATC TTTGATCCTC AAGACAAAAC ACTTCTCATA TGGAACAGAT TGTTCGTCAT TTCGTGTATT TTAGCTGTCT CAGTTGATCC ATTGTTCTTC TATCTTCCCA TTGTCGATAA TTCCGGAAGC AGCTGTATAG GGATTGACAC GAAACTAGCT GTTACAACGA CGACCCTTAG AACCATCGTT GATGTCTTTT ACTTAACTAG AATGGCTCTT CAGTTCCGAA CAGCTTATAT AGCTCCTTCC TCTCGTGTGT TTGGTCGTGG TGAGCTTGTG ATTGATCCTG CAAAGATCGC GGAACGGTAT TTAACCCGTT ATTTCATCGT CGATTTCCTA GCAGTGCTTC CTTTACCGCA GATTGCGGTA TGGAAGTTTC TTCACGGGTC TAAAGGATCA GATGTGCTAC CGACGAAAAC GGCATTGTTG TACATTGTAA TCGTGCAGTA TATTCCGAGA TTCATGAGGT TTATTCCGTT AACATCAGAA CTGAAGAAAA CTGCTGGAGC TTTTGCTGAA GGAGCGTGGG CTGGTGCTGC TTATTATCTC CTCTGGTATA TGCTTGCAAG CCACATAACT GGAGCGTTTT GGTACATGTT GTCAGTGGAA CGTAACGATA CTTGTTGGAG ATTTGCTTGT AAGGTCCAGC CAGATCCGCG ACTCTGTGTT CAGATTTTGT ATTGTGGGAG TAAATTTGTG AGCAATCGCG AAACTGAATG GATCAAAACA GTCCCTGAGC TTCTCAAGAG CAATTGTTCC GCTAAAGCAG ATGATTCAAA GTTTAACTAT GGGATATATG GTCAGGCAAT ATCTTCAGGC ATTGTATCAT CAACAACATT TTTCTCCAAA TTCTGTTATT GTCTATGGTG GGGTCTTCAG AATCTCAGCA CGTTAGGTCA AGGACTGCAA ACAAGTACAT TTCCAGGAGA GGTTTTGTTT TCCATTGCGA TTGCTATAGC TGGTCTTCTT CTTTTCGCGC TTCTTATTGG GAATATGCAG ACTTATCTTC AGTCACTTAC TGTTCGTCTC GAGGAAATGA GGATTAAAAG ACGCGACTCG GAACAGTGGA TGCATCACAG GTCCCTTCCA CAAAATTTGA GGGAAAGAGT CAGACGCTAT GATCAATACA AATGGTTAGA GACAAGAGGT GTAGACGAAG AAAACATAGT TCAGAGTTTA CCTAAGGATC TCAGGAGAGA CATCAAACGC CATCTCTGTC TCAATTTAGT TAGGAGGGTT CCTCTGTTTG CTAATATGGA TGAAAGATTA CTTGACGCGA TCTGTGAGAG ATTAAAGCCG AGTCTTTACA CGGAAAGCAC TTACATTGTG CGTGAAGGAG ACCCGGTTAA CGAAATGATG TTCATAATCC GAGGCCGGTT AGAGAGTGTA ACAACAGATG GAGGACGAAG CGGTTTCTTC AACAGAGGGT TATTGAAAGA AGGAGACTTT TGTGGTGAAG AGCTTCTGAC ATGGGCACTT GACCCTAAAG CAGGCTCAAA CTTACCTTCT TCCACAAGAA CAGTGAAGGC TCTAACTGAA GTAGAGGCTT TCGCTCTTGA AGCTGAAGAG CTGAAGTTTG TAGCAAGTCA GTTTAGGAGA CTTCATAGTC GACAGGTTCA ACAAACATTT AGGTTTTACT CTCAGCAATG GAGAACTTGG GCTTCTTGCT TCATCCAAGC TGCTTGGCGT CGCTATTCAA GAAGGAAAAA CGCTGAACTG AGGCGGATAG AAGAAGAAGA AGAAGAAATG GGTTATGAAT ATGAGTATGA TGAAGAAAGT GACAAGAGGC CTATGGTTAT CACAAGAACT GAGTCTTCTT CTAGACTGCG TTCAACGATA TTTGCATCAA GATTTGCTGC TAATGCATTG AAAGGGCACA GACTAAGGAG CTCAGAGAGT TCAAAGAGCT TGATGAATCT GCAAAAGCCT CCGGAACCTG ATTTTGATGC TGAATAA 
Length2217
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6444925.. 6447531
Download Sequence
A.thaliana
AGI-codeAT1G15990.1
Descriptioncyclic nucleotide gated channel 7
TAIR curator summarymember of Cyclic nucleotide gated channel family
Alias[ATCNGC7][CNGC7][cyclic nucleotide gated channel 7]
Gene coexpression
MR
MR Locus Description
22.3607 Ahg924675 hAT dimerisation domain-containing protein / transposase-related
28.6705 Ahg330810 crooked neck protein, putative / cell cycle protein, putative
51.3615 Ahg934838 Integrase-type DNA-binding superfamily protein
60.9672 Ahg947478 cyclic nucleotide gated channel 7
62.0645 Ahg895426 cyclic nucleotide gated channel 7
66.5733 Ahg892004
68.3008 Ahg497391 Protein of unknown function (DUF1313)
76.6029 Ahg470930 threonine aldolase 1
85.6446 Ahg484816 zinc induced facilitator-like 2
88.4308 Ahg942580 copper ion binding;electron carriers
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression