| Annotation |
|---|
| Description | jgi|Araly1|912688|Al_scaffold_0001_2942 |
| Sequence |
ATGGCTATGA AGGAAGCCTT TCCGGAAGAT TACCTTTCCC AAAAGGAGCT CGAACAATCT TTAGACGCTT CTCATCATGA AAATCCATCA GCTGGGAGGG CAAAGAGGAA GAGGACAGTA AATAATACTG AGGTAAAGAA GAGGACAGAA AAGAAGACTG AGTTAAAGAA GAGGACAGAA AAGAAGACTG AGGAAGCTTA TCTTGCCAAA GTCGAGCAGC TTGCTAAACT CAAACAAAAG CAGGAGGAGG ATAAAGCAGC TGTGACACTG CACTGCTTCA GCAAGACTTG TGAGACTGGT AAAGATGTAG CTGCACCTCC AGAAGGCTTT GAGCAGATGC AATCTCTTAG GTTCATAGAT AATAATTACA CGCAGGTGAA GCCATCGGAC ATCCAGGGAC AAGTGGATCC GCTATTTCCT GAAGTCATTT TGTGTCTTGA GATTTATAAC AGTCGCAAGG TTAAGATCCA AGAATTTTTG GTTCTAGGAC GTCAAATGTT GACTGAATTG AAGGACAACA TTCACTGTGC TACAGACCAG GTGATGAAAA AGGCTGGGAA GTATGATCCC TCTGGATACT TCCTCATAGA AGATGTCTTT CACAATGATT TAAGGAATCC CTCGGCTAAA GATTACAGCT ATCCTATTTT AGATTGGCTT TGGAACTCGA AAGATGAGGC TCTTAAAAAA TGGGAATGCG TTTTAACCGG CGAATTACAT AAAAAGCAGA AACTGGTTCT AGGTGAAGCG AAATCTGTGG ATTTACCTCG TTACGGAACT GCAGACATGC AGAGTACACG CTTCTGTGAT ATAAGATTCA GAGTCGGAGC TAATTATCTC TATTGTCATC AGGGAGATTG CAAGCACACG ATTGTGATTC GGGACATGAG GCTGAGTCAT CCAGAGGACG TTCAGAGTAG AGCGGCTTAC CCGATCATGT TTCGACCGAA ACGTAGGCTT CAGAAATGCG GTGTTTGCAA GATAAAGAGA GCTTCAAAGG TTGCAGTGGA TGACAAGTGG GCCAACGAGA ACACTTGCTA TTTCTGTGAT GTTTGTTTTG AGCTTCTACA CTCAGAGGAA GGCCCACTTA ACCGTGACTT CCCAGTGTAT GATTATGTGT ATGACTGA |
| Length | 1128 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 11986529.. 11988728 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G28560.2 |
| Description | snRNA activating complex family protein |
| TAIR curator summary | Encodes a protein similar to human SNAP50. Mutants display different temperature sensitivities in the dedifferentiation of cells from different organs. Mutation inhibits the dedifferentiation-associated accumulation of U-snRNAs and some other small RNA species encoded by independent-type genes carrying the USE and TATA box. Required for the elevation of cell proliferation competence in hypocotyl dedifferentiation. |
| Alias | [SRD2][SHOOT REDIFFERENTIATION DEFECTIVE 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 20.6155 |
Ahg910318 | |
| 23.8328 |
Ahg356455 | Leucine-rich repeat (LRR) family protein |
| 36.1801 |
Ahg492791 | Cytidine/deoxycytidylate deaminase family protein |
| 54.3691 |
Ahg358554 | |
| 56.5597 |
Ahg941190 | Exostosin family protein |
| 63.1981 |
Ahg324269 | Peptidase S41 family protein |
| 84.5991 |
Ahg473319 | ribosomal protein L2 |
| 84.6463 |
Ahg496051 | |
| 93.4024 |
Ahg482349 | Calcium-binding EF-hand family protein |
| 99.2421 |
Ahg492753 | Tetratricopeptide repeat (TPR)-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|