Detail



ID : Ahg356455

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|356455|fgenesh1_pg.C_scaffold_8000242
Sequence
ATGGTTACTA CATGGAAAAG TATTCGTTTT GGCTTCGCTT CATCGGGTTC ATATTTCGAG TTGGTTCTTC ATCAACTAGT CCCATGTCTG ACAGATATCT TGTTAGCTAG GGAATTGCAG GTACTCGTTA CCATTCTGAT CATGACGCAG CAAGAATATA ATATCGACAA GATTATCAGC TACCTATCTG AGTTGCAGAC TCAGCTAAGT CAAATACCTC TATCCAAGAA AGCTACTGTT AACAACAATG AACAGCCGAG CGAAAGACGA AGTGAGGAGA AGAGACACAC CAAGTCCTGT GACAGACGAA ATGAGGAGAA GAAGAGACCA TCTTGGTGGG TTCGGTTCAG AGAAAAACTT AAAAAAATTT GTAAGGTGAA GAACGAGGCA ACAAACCATG CAAGCGATAG TAAAGACAGT CAAGGTGGAA GCAGAAGAAT CATGCGATAC ACTGACGAAG ATGAAGATGC AGACCTCGAC ATCCGGAAAT TGCAGAGTGA CATTGGTCAG ATGATATCTG CATTTAAGAA TTGGACTCAG TTTCAAAACA ATATGAGCAA GTCGTTGGAG AATGATCTTC GTTCAAGTAT GGTTGGAGCA ATACTACAGA AGACGGGTTC AATCAAGTCC CGCACTCAGG ATCTCAAAGA AATCAGAAGA AAGATCTCCG CCTTGAAGTG CCAGATCCCA TCATCGCTCT ACAAACAATC ATCCAGGGTG TTAAGCATCA CGGAATCTCT AACCGATGAG GATATTGATG AGATCAATGA GACCGGGAGC GACATATACT TGCCCGACCT CCACGTTTCT GAAGATTTCA AACATTCCTC AGGTTTTGAA GACGTTGTAG AGAAATTTCA AGGCCTTGAT GACTTCACTC AAAAGCTCTG CTTGTTGTCC TTCGCCGTGT TCCCGGAAAA CAGAGAGGTT ACAAGGACAA TGTTGATGTA TTGGTGGATC GGAGAAGGTT TCATCGATTG TGATGATTCT GAAAACTCAG TAACGAGAAT TCTTGATGCA TTCTCAGCAA AAAAATTACT TGAGCCGGTC GAAGATGAGA GGAAACTGCT ACCAAATAGT TATAAGATGG AGCCTCATGT GCATTCTGCA GTTATATACT TAGCCAAAGA AATGGATCTA TTTGAACTCT ACAACCATAA TGGGAAGCTT ATCATGAAAA AATCATCGAA GAAAAAGGTC TGCCTAGTAA AAGGTTCCTC GTTGCTACGA GACGCAAAAA CATCTGCAAT GAAACCGAAA ACATTGCAGA CGGTTTTCAA TTCCTCTGAA CGGTTCCCTG ATTTCACATT CAAGTGGTTT CCGTTAATGG ATTCAATTAG AGTGCTTTAT TTAGGAAGAT GGGAGCGGAT GGCTGAGCGC CACATTGAAG TTGAGAGCAC GGAGTTTCTT AAAAATATGA AGTCTCTGAA GAATCTGAGG CTTGCAAGTT TTCAAGGGAT CTCAGGAATC AAAAAGATCG ATAACTCAAT TTGTGCGCTC CAAAAATTGA TGATCTTGGA TCTTAGAGCA TGCTACGATC TACAGGTTCT TCCTAACGAT ATAGGCTCAC TTGAGAATCT GATTTACTTG GATGTATCAG AATGCCTTAA GCTAGATTGC ATGCCTGATA GGTTTGAAAA ACTCTCAGGA TTACAGGTTC TTAAGGGATT TGTGATTAGT CAGTCAGATG ATGAACACAA TTGTGCAGTT AAACACCTGG TGAATCTGAG GAAGCTAAGC ATAACCATAA AAAATTACCG TTTCAAGGCA GAAAATCTAA TTGAGTCATT GAGAGACCTC AAGCAACTTG AGAGTCTGAC ATTCGCATGG AGAGCGCGAT TCCCTGTGGA TGACCGAAGA GGAGAAGAAA CTAAAGAAGC AAAACTGTTA ATGGGAATGT GCAACCAAAC CAAGAAATGG GGAATAGGAT GGCAAGAAGA TCAATCAATA GATGATACCT ATAAATTCCC TGATCGTTTG AAGAAGTTGG AGCTAGAATG TTTCCCTGAA ACAGAACCTC CGAGTTGGTT AAATCCCAAA GATCTTAAAG AGCTTAAAAA ACTCTCCATC AAAGGAGGAA AACTTAGTCG TATGAGTGAT GAAAGTCGAA ACACAGAAGA CAAATGGGCC GTTGAGATCT TGCGTTTGAA GTATCTGCAT GAATTCAAGG TTGAGTGGAG AGATTTGAAA GCTCTGTTTC CAAAAATGAC ACTGTTGGAG AAATATAAAT GCCCTAAAAT CGCATTCTGT CCAACAGATG GTAATGGAGT CTGGAGGTCA CAGCCAGAGA CATCACCAAA TATGTGA 
Length2307
Protein Sequence
Protein Residue
Map Locationscaffold_8: 1540128.. 1550894
Download Sequence
A.thaliana
AGI-codeAT5G45520.1
DescriptionLeucine-rich repeat (LRR) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.7178 Ahg476277 Pentatricopeptide repeat (PPR-like) superfamily protein
13.8924 Ahg922436 RING/FYVE/PHD zinc finger superfamily protein
17.2047 Ahg358384 calnexin 1
19.6214 Ahg489043 Ubiquitin carboxyl-terminal hydrolase family protein
23.8328 Ahg912688 snRNA activating complex family protein
35.1568 Ahg950917
35.1568 Ahg485925
43.7493 Ahg940129 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
46.6905 Ahg470669 glucan synthase-like 7
66 Ahg490249 BRCT domain-containing DNA repair protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression