Detail



ID : Ahg913246

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|913246|Al_scaffold_0001_3500
Sequence
ATGGAAAACA ATGAAGAATT GAATGCCCAG CCTGAATTAT TAGGCATAAT TGATAGAACC CAGACCTATA TGTATGAGCA ATTGTGGAAA ATATGTGCTG GACCTTTGTG TGATCTTCCA AAACCTGGAG AAAAGGTTTA TTATTTTCCT CAAGGGCACA TTGAGCTCAT TGAAGCATCT ACAAAAGATG AGTTGGATCA GATAAGGCCA CATTTTGATC TTCCATCTAA GCTTCGATGT TGTGTTGATG ATATTCAACT TAAGATAGAC CAAAATACGG ATGACGTCTA CGCAGAGATT TATTTAATGC CAGATACAAC AGACGTTATA ACTCCTATTA CTACTATGGA TAATCAAAGA CCAATGGTTT ATTCTTTTAG TAAAATTTTA ACTTCGTCTG ACGCCAACAC ACATGGTGGA TTATCTATTC TTAAAAGACA TGCCACTGAA TGTCTTCCTC CGCTGGATAT GTCCCAACGA ACGCCTATGC AGCATCTTGT TGCGAAAGAT CTCCATGGTC GAGAATGGAC ATTCAAGCAT TCTTTTAGAG GTACACCGCG GAGACATCTT TTTACCAGTG GCTGGAGCTT ATTTGCAACA ACAAAAAGAT TGATTGTTGG GGATGCTTTT GTATTCCTTA GAGGAGAGAA TGGGGAGCTA GGAGTTGGTA TTAGGCGAGC AAGACATCAA CTAGGCCACA AACCTTCATT AGTAATATCA ACACAGTGTA TGAAAGATGG AGTAATTGCT TCAGTAGTAA ATGCTTTTAA AAGCAAATGC AAGTTCATTG TGGTTTATAA GCCAAGTTCA AGTCAATTTG TTGTAAATTA TGACAAGTTT GTTGATGCAA TGAACAATAA GTTTATTGTT GGTTCGAGAT TTAGGATGCG GTTTGAGGGT CAAGATTTTT CTGAAAAAAG ATACTCTGGG ACGATTATTG GTGTAAATGA CATGTCTCCT CATTGGAAAG ATTCGGAATG GCGAAGCCTA CAAGTGCAAT GGGACGAGCT TTCACCATTT CCAAGACCTG ATAAGGTTTC ACCATGGGAA ATTGAACATT TAATCCCTTC GTCAAGTATT TCCCAGCCAA CTGTACTCCA GAAAAAACGT GCACGTCAAT GTAATGAAAT CGGTTCAACA TCATCGAATC TTTTGACAGG CCAAGAAATT GGACAATCGA GCTTGAGTTC TCCGAAGAGT GTTCCTGAGT TTAGTTGTCG CGATGCAGTT GAAGATTCCA AGTTTCCTTC TGATTGGCTA ATGAGTGACT TAGTCCCAGC CATACCTAAA CCAAACAATA ACAACAACCA ATTGGTTCAA CAAACGAAAG AAAAGATAAC AACTGAAGCA ACCACTAGTT GCATATTGTT TGGAGTTGAT CTTACCAAAG CCTCAAAGAC CAAAGATCCC ATGGGTCCAA TTGAAGCAAC CGAAACAACC ACTAGTTGCA TACTCTCTCA AGATAAAAAA CTTGACCAAA CCCTAACTTG GACATCACCA AAAGAGGTCC AAAGCAGTAA ATTCAATTCT ACTAGACGTC GGATAAAGGT TCAGATGCAA GGTGTAGTCA TTGGCAGAGC TGTGGATTTA ACTGTTTTTC ATGGATACAA TCAGTTGATA CAAAAACTAG AAGAACTCTT TGATCTCAAA GACGAGTTAC GAAGCCGCAA TCAATGGGAA ATAGTTTTTA TAAACAATGA AGGAAATGTG ATGCCTCTCG GGGATGATCC ATGGCCTGAA TTCTGCAATA TGGCGAAAAA AATATTTATA GGCTCAAAAG AAGAGATAGA AAAGATGAAG TCCCGGAACA AAGTTTCTCA AGCTAAATCA ACAGTTTTAA CATCTTCTTC TGACGTACCA CCAAACGTCA AAGCATAA 
Length1878
Protein Sequence
Protein Residue
Map Locationscaffold_1: 15166796.. 15169989
Download Sequence
A.thaliana
AGI-codeAT1G34170.3
DescriptionAUXIN RESPONSE FACTOR 13
TAIR curator summary
Alias[ARF13][AUXIN RESPONSE FACTOR 13]
Gene coexpression
MR
MR Locus Description
21.8861 Ahg949205 transposable element gene
34.0294 Ahg936150 F-box family protein
43.2666 Ahg334132 Aluminium activated malate transporter family protein
47.9687 Ahg896853 Domain of unknown function (DUF26)
53.2916 Ahg915157
58.8218 Ahg477013 Terpenoid cyclases family protein
72.0555 Ahg906065
72.6636 Ahg899869 SU(VAR)3-9 homolog 7
75.9144 Ahg930652 Glycosyl hydrolase superfamily protein
76.8375 Ahg358371 Pectin lyase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression