Detail



ID : Ahg915045

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|915045|Al_scaffold_0009_14
Sequence
ATGGATGGTG AGGAACAGCA AATAGATGGT GATGAAGTTA ATAACCATGA GAACAAGTTG AATGAAAAAA AGAAATCATG GGGAAAACTA TATCGACCCG ACTCTTTCAG CATAGAGGCC GGACAAACTC CAACAAATAC CGGGCGTCCC TCATTGATGA GCTGGACAAC GACGATGAGT TTGGCATTTC AGAGCCTAGG AGTGGTGTAT GGAGACATCG GGACATCACC GTTGTATGTG TATGCAAGTA CTTTCACTGA AGGCATCAAT GACAAAAATG ATGTCATTGG TGTTCTCTCG CTCATCATCT ACACGATTAC TCTCGTCGCA CTCCTCAAAT ACGTTTTCAT TGTTCTTCAG GCTAACGATA ATGGTGAAGG AGGAACATTT GCTTTGTACT CGCTGATATG TCGGTATGCG AAAATGGGAC TAATTCCAAA CCAAGAACCA GAAGATACAG AACTCTCCAA CTATACTCTT GAACTTCCAA CCACACAGCT CAAAAGAGCC CATATGATCA AAGAGAAGCT CGAGAGTTCT AAATTCGCTA AGATTATACT CTTCCTCGTC ACTATTATGG GAACTTCCAT GGTCATTGGT GATGGCATCC TTACTCCTTC CATTTCAGTA CTTTCAGCAG TAAGTGGAAT CAAATCTCTC GGCCAAGACA CAGTTGTGGG TGTTTCGGTT GCAATCTTGA TTGTTCTATT CGCATTTCAG CAGTTCGGAA CCGATAAAGT CGGATTCTCA TTCGCTCCGA TCATCCTCGT ATGGTTCACA TTTCTGATCG GAATCGGTCT TTTTAATCTG TTCAAGCATG ACATTACCGT CTTAAAGGCA CTTAATCCAC TCTATATCAT TTACTACTTT AGAAGAACTG GTCGAAAAGG TTGGATTTCC CTCGGAGGTG TTTTCCTTTG CATCACTGGA ACGGAGGCCA TGTTTGCTGA TCTAGGTCAT TTTAGTGTTC GAGCCGTACA GATTAGTTTC TCATGTGTCG CATATCCGGC GTTAGTAACA ATATATTGCG GGCAGGCTGC GTACCTTACT AAACATACTT CCAATGTGTC CAATACTTTC TACGACTCAA TCCCTGATCC GTTATACTGG CCAACATTTG TTGTGGCGGT GGCAGCATCG ATCATCGCGA GCCAAGCTAT GATATCGGGA GCCTTTTCAG TCATCTCGCA ATCTCTACGT ATGGGTTGTT TCCCTCGAGT GAAAGTGGTT CACACCTCGG CTAAGTACGA GGGACAAGTC TATATCCCGG AGATCAACTA CTTACTCATG CTTGCATGCA TCGCTGTTAC CGTCGCTTTC AGAACCACTG AGAAGATTGG CCACGCTTAT GGGATCGCCG TTGTAACCGT CATGGTCATC ACAACCTCAA TGGTGACTCT CATAATGTTG GTTATCTGGA AGACGAACAT AGTGTGGATT GTTATCTTCT TAATCGTCTT TGGCTCCATA GAGATGTTAT ACCTATCGTC GGTCATGTAC AAGTTTACAA GCGGTGGGTA TTTACCACTT ACGGTAACGG TCGTTTTGAT GGCGATGATG GCGATTTGGC AATATGTTCA TGTCCTCAAG TACAGGTACG AGCTGAAGGA GAAAATTTCT CGTGAAAATG CTATACAAAT GGCTACAAGT CCTGACGTAA ACCGGGTTCC AGGGATTGGT CTTTTCTACA CGGAGCTTGT TAACGGTATA ACTCCATTGT TCTCTCATTA TATTTCGAAT CTTTCGTCGG TCCACTCGGT TTTTGTCTTG CTATCGATCA AGACACTTCC CGTGAATCGG GTGACATCAT CAGAGCGGTT CTTTTTCCGT TACGTGGGGC AAAAAGATTC AGGAATGTTT AGGTGTGTTG TGAGGTATGG TTACAAAGAA GACATTGAGG AGCCTGATGA GTTTGAGCGT CATTTTGTTC ATTACCTAAA GGAATTCATT CATCACGAGC ACTTCATGTC CGAAGGAGGA GGAGACGTGG ACGAGACTGA CAAAGAAGAT GAACCAAATG TGGAGACAAC ACTTGTGCCT TCGTCTAACT CTGTCCCTTC ATCGGGGCGG ATCGGATCCG CGCATTCATC TTCGTCGGAC AAGATTAGGT CAGGAATGGT CGTACATGTG CAATCTGTTG AGGATCAAAC GGAGTTGGTG GAGAAGGCAA GAGAGAAAGG AATGGTTTAT CTAATGGGAG AGACGGAAAT TACCGCGGCA AAAGATTCTT CTTTGTTTAA GAAGTTTATA GTGAACCATG CTTACAATTT CTTGAAGAAG AATTGTCGGG AAGGAGACAA AGCACTTGCG ATTCCTAGGT CAAAGCTTCT CAAGGTTGGC ATGACTTATG AGTTATAA 
Length2358
Protein Sequence
Protein Residue
Map Locationscaffold_9: 205347.. 222585
Download Sequence
A.thaliana
AGI-codeAT4G13420.1
Descriptionhigh affinity K+ transporter 5
TAIR curator summaryEncodes a protein of the KUP/HAK/KT potassium channel class that is upregulated in the roots by K levels.
Alias[ATHAK5][HAK5][ARABIDOPSIS THALIANA HIGH AFFINITY K+ TRANSPORTER 5][high affinity K+ transporter 5]
Gene coexpression
MR
MR Locus Description
5.83095 Ahg915047 high affinity K+ transporter 5
12 Ahg486927 cation exchanger 4
14.3875 Ahg351609 Protein of Unknown Function (DUF239)
18.5472 Ahg342636 AP2/B3-like transcriptional factor family protein
21.2132 Ahg351608 Protein of Unknown Function (DUF239)
23.622 Ahg950935 Protein of unknown function (DUF1216)
25.923 Ahg478320 GDSL-like Lipase/Acylhydrolase superfamily protein
28.2843 Ahg933363
32.3265 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
32.7261 Ahg917658 subtilase 4.13
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression