Detail



ID : Ahg916107

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|916107|Al_scaffold_0008_858
Sequence
ATGTTACATC GGACTCTCTT GTGTCCGAGA CGTCTCAAAT TTTTGCTATC TGCTAGTAAT TACAAGCGGC ACATTGCTCA GGTTCACGCT TTCGTAATTA CTTCCGGTAA TTTACTAAAT GGAAGCTCCA TTAGTCGCGA TCTCGTTGCT TTATATGGAC GAATCGGGGA GATCTCTTAT GCACGTAAGG TGTTCGACCA ATTGCCTCAG AGAAGTGTTT CTGTTTATAA CTCCATGATT GTGGTTTATT CTCGTGGAAA CAACCCGAAT GAGGTTTTGA AACTTTATGA TCAGATGATA TCTGAAAGGG TTAAACCAGA TAGCTCAACG TTCACTATAA CGATCAAAGC GTGTTTGAGT GGTATGGCTT TAGAGAAAGG AGAAGCTGTA TGGAGTAAAG CAGTTGAATT TGGGTATAAA AATGATGTCT TTGTTTGTTC ATCTGTCTTG AATCTGTATA TGAAGTGTGG GAAAATGAAT GAAGCTGAGG TTTTGTTTAG AAAGATGACG AAAAGAGATG TTATTTGCTG GACAACAATG GTGACAGGAT TTGCACAAGG TGGTAAGTCA ATGAAGGCTG TTGAGTTTTA CAGAGAAATG CAGAATGAAG GATTTGGTAG GGATAGGGTT GTGATGTTGG GTCTTTTACA AGCTTCTGGT GATCTCGGGG ATGCGAAAAT GGGCCGTTCG GTTCACGGGT ATTTGATTAG AACAGGTCTT CCTATAAATA CTGTAGTTGA AACCAGCCTG GTTGATATGT ATGCTAAGGT TGGGTTTATA GAGGTTGCTT CCAGGGTGTT TAGTAGGATG ATGTTTAAAA CAGCGGTCAC GTGGGGGTCG TTGATCTCTG GATATGCTCA AAATGGATTA GCTAATTATG CTTTTGAAGT AGTAGTAGAG ATGCAGAGCC TTGGGTTTCA ACTGGATTTA GCGACTCTTG TTGGAGTACT TGTGGCGTGT TCGCAAGTTG GGTCATTAAC GACTGGTATA TCGGTACATT GTTACATTTT GAAAAGGCAC GTTCTTGATC GAGTAACCGC GACTGCACTG ATGGACATGT ATTCAAAATG CGGCGCTCTT TCAAGTTCGA GAGTAATCTT TGACCATGTA GGAAGGAAAG ACTTGGTTTG TTGGAACACA ATGATATCTT TTGTATCAAT GTTCCTCAAA ATGACGGAAA CTAACATAGA ACCAGACCAC GCCACGTTTG CATCCCTTCT CTCTGCTCTT AGCCACTCGG GTCTCGTAGA ACAAGGCCAA CATTGGTTCA GCGTCATGAT AAACAAATAT AATATTCAAC CGAGCGAAAA ACACTACGTT TGTTTGATCG ATCTCCTCGC ACGTGCAGGG AGAGTTGAAG AAGCTCTTGA CATGATAAAC TCGGCCAAAC TTGACAATGC TTTACCCATC TGGGTTGCTC TTCTCTCAGG ATGCATCAAT CACAGGAATT TATCAGTCGG GGACATCGCG GCTAATAAGA TTCTCCAGCT GAATCCAGAT AGCACCGGGA TCCAAACGCT GGTTTGTAAC TTTTTTGCAA CTGCGAGAAA GTGGACGGAA GTGGCCAAAG TGAGGAAATT AATGAGAAAT GGGGCCATGG AGAAAGTACC AGGCCAGAGT GTGATTGAGA TGAATGGACA GCTTAGAACT TTTCTCATGG AGGATTTGAA CCACCATGAG CATGCTCACA TATTGCAAGT GCTGAGAAAC TTAAACTCTG AGATGAAGAA TGTATATACA TCCATTTCTG AATGTGTTAT TTCCCATTCG TAG 
Length1773
Protein Sequence
Protein Residue
Map Locationscaffold_8: 5985217.. 5987019
Download Sequence
A.thaliana
AGI-codeAT3G25060.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias[MEF25][mitochondrial RNA editing factor 25]
Gene coexpression
MR
MR Locus Description
22.0454 Ahg949567
36.4006 Ahg917658 subtilase 4.13
42.7083 Ahg922313 MAP kinase kinase 10
49.8498 Ahg496956 Tetratricopeptide repeat (TPR)-like superfamily protein
62.2896 Ahg897183 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
67.5056 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
74.3303 Ahg929611
82.359 Ahg487136 iron regulated 2
93.723 Ahg892274 SGNH hydrolase-type esterase superfamily protein
95.163 Ahg488975 Leucine-rich repeat protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression