Detail



ID : Ahg487136

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487136|fgenesh2_kg.6__270__AT5G03570.1
Sequence
CAGATTCAAT TGATATTCAG AGGAAAGAAT CAAAGTAGTC TGAAGAAATG GAGGAGGAGA CAGAAACTAG GGTTTTTCTA TCAAGCGAAC AACATCAAGA AGAAGAGCCG TCGTTGCCAC GTTCCATGGT GATCTCTCTC TATCTCGGCT ATTTTCTTGC TCGATGGGGA GCAAGAACTT GGGAATTCTC TGTTGCTCTG TATATGATTT ACCTCTGGCC AAACTCTCTG TTTCTCACTG CAATGTACGG TGTTGTAGAA TCCGGTTCTG CCGCTATTTT TGGTCCCATT GTAGGCCAAA TGATTGATGG AATGAGCTAT GTTAAAGTTC TTAGACTCTG GCTTGTAACT CAAAACCTCT CCTTCATTGT TGCGGGTGGT GCAGTCGTTG CTTTGCTTCT AGTTCCTGAT CTTAGGTCTC ATAATTTCCC TGTTTTCGCA ATATTGGTCG TGTTGACTAA TGTTTCTGGC GCCATTGGAG TACTCTCTAC TCTTGCAGGC ACCATTTTGA TCGAACGAGA CTGGGTTGTG GTTATGTCGG AAGGTCATTC ACCAACAGTT TTAACAAGAA TGAACTCTGT TATCAGAGGC ATTGACTTGA GCTCGAAGCT ACTGTCTCCG GTTATAACTG GTTTGATCAT TAGCTTTGTA TCTCTTAAAG CATCAGCTAT AACATTTGCA GCTTGGGCTA CTATAACCGT GTGGGTTGAG TATTGGCTCT TTATCTCTGT GTATAACGGT GTTCCTGCGA TAGTTCAAAG CGATGAGAGA AGGAGATTAA GGTTGTCTCA ATCGCAAGGG GAAGAGACAG ATAGTGCATC TAGTTTTTAT GTTCCTCTTT TACACGAAGA GGAGTCTTAT AGGAAATCGC AAAGTAGAAG CGGAATCTTT AGGATTCTTG AGAGAATCTC TGAGTCTTCT TTTGTTAGCG CATGGAGGAA TTATCTCAAT CAAGAGATTG TGCTCCCTGG AGTTGCTCTA GCTCTCTTGT TCTTCACCGT CCTCAGCTTT GGAACATTGA TGACGGCGAC ATTGGAGTGG AAAGGGATAC CTACTTATAT CATTGGTATA GGCAGAGGAA TCAGTGCAGG TGTTGGACTA GCTGCTACCG TTTTGTACCC TCTCATGCAA TCCCGTATCT CACCTCTCAG AACCGGACTC TGGTCCTTTT GGTCTCAGTG GACCTGTCTT TTGGTGTGTG TTGGATCAAT TTGGGTTGAG AAGGAGAAAA TAGCATCATA CATGCTCATG GCTGGTGTTG CTGCTTCTAG GCTTGGTTTG TGGATGTTCG ATCTTGCGGT AATCCAACAA ATGCAGGATC TTGTTCCGGA ATCCGACCGT TGTGTGGTTG GAGGTGTTCA GAACTCATTG CAAGCGGCTC TTGCCTTGAT GGCTAATCTT TTGGGTATCA TTGTATCTAA TCCTAAGGAT TTTTGGATGT TGACGTTGAT CTCATTTGCT ACGGTTTCGT TTGCCGGAAT GCTCTATACG ATTCACCTCT ACCGTATTCG AAAACATCTA TTTCACTTGG AGAAGATTCC CTTATTGAAC AACTTTCTTG TTTCATGAAA AA 
Length1572
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1017354.. 1019483
Download Sequence
A.thaliana
AGI-codeAT5G03570.1
Descriptioniron regulated 2
TAIR curator summaryEncodes FPN2, a tonoplast localized nickel transport protein. FPN2 is one of the Arabidopsis orthologs (AT2G38460/IREG1/FPN1 and AT5G03570/IREG2/FPN2) the iron efflux transporter ferroportin (FPN) identified in animals.
Alias[ATIREG2][FPN2][IREG2][ARABIDOPSIS THALIANA IRON-REGULATED PROTEIN 2][FERROPORTIN 2][iron regulated 2]
Gene coexpression
MR
MR Locus Description
16.8523 Ahg949333 C2H2-like zinc finger protein
26.6833 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
30.3315 Ahg924343 F-box associated ubiquitination effector family protein
30.5614 Ahg484455 AP2/B3-like transcriptional factor family protein
31.1769 Ahg492537 Protein of Unknown Function (DUF239)
35.8329 Ahg931891
38.1051 Ahg487525 nodulin MtN21 /EamA-like transporter family protein
44.3959 Ahg337099 tRNA synthetase class I (I, L, M and V) family protein
55.7494 Ahg929121
61.0819 Ahg906590 Cysteine/Histidine-rich C1 domain family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression