Detail



ID : Ahg917676

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|917676|Al_scaffold_0008_2427
Sequence
ATGGAAAACG AAGGAAACGT TGGAACGGCA AGCAGTTCAC GATGGAACCC AACAAAAGAT CAGATAACGC TACTGGAAAA TCTTTACAAG CAAGGAATAC GAACTCCGAG CGCCGATCAG ATTCAGCAGA TCACCGGCAG GCTCCGTGCG TACGGCCATA TCGAGGGTAA AAACGTCTTT TACTGGTTTC AGAACCATAA GGCTAGACAA CGCCAAAAGC AGAAACAGGA GCGCATGGCT TACTTCAATC GTCTCCTCCA CAAAACCTCC CGTTTCTTCC ACCCTCCTCC TTGTTCAAAC GGCACATTTC TTCCGTTTTC TTTGGGTTGT GTTAGTCCGT ACTATTTGCA GCAAGTAGGT TTGAATCAGC AACATGGAAG TGTATACACA AACGATCTTC TTCACAGTAA CGATATGATG ATTCCAAGTG GTGGCTACGA GAAACGGACA ACCACAGAAC ATAAGAAACA ACTTTCAGAC TCAACATCAA CTAGAATGCC AATGTCTTCG AGCTCACTCA GATATGACAG ATTTGCCCTT CGTGATCACT GTTATTACGG TGAGGGCATT AACGGCAATT CCAGTGGGCG GAAAACACTT CCTCTTTTTC CACTTCAGCC TTTGGATGCC ACTAATGACG ATGGTGTTGG AAATTCCAGT TTTGCCCTTG GTAGTGATTC TCCGGGTGTT TGTTCTGGCG ACGGTGGCGG CCGAGAGCAG CCGTTTATTG ATTTCTTTTC TGGTGGGACT AGTCGTTGTT TCGATAGTAG TGGAAATGCG TTGTAA 
Length786
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17912636.. 17913849
Download Sequence
A.thaliana
AGI-codeAT5G59340.1
DescriptionWUSCHEL related homeobox 2
TAIR curator summaryEncodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. WOX2 has a putative Zinc finger domain downstream of the homeodomain. Transcripts are expressed in the egg cell, the zygote and the apical cell lineage and are reduced in met3-1 early embryos. This gene is necessary for cell divisions that form the apical embryo domain.
Alias[WOX2][WUSCHEL related homeobox 2]
Gene coexpression
MR
MR Locus Description
7.07107 Ahg927655 Peroxidase superfamily protein
17.6068 Ahg912062 Protein of unknown function (DUF626)
23.9583 Ahg937553
27.1109 Ahg488648 Peroxidase superfamily protein
29.5973 Ahg351609 Protein of Unknown Function (DUF239)
31.273 Ahg477911 NOD26-like intrinsic protein 7;1
35.7071 Ahg950934
35.7071 Ahg950930
40.4351 Ahg485653 purple acid phosphatase 21
43.8634 Ahg932623 casein lytic proteinase B4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression