Detail



ID : Ahg918021

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|918021|Al_scaffold_0008_2772
Sequence
ATGGCGACGA AGAACACGAA GCAAAACATG TCCGTGCTGT TAACTAAGCT CGGAGATCGA GATACTTTCA CAATGGCGGC TCGAGAGCTT GATTTAATGG CTAGACAGAT TGATCCTTCC TCCTCCGGGA ATCTCCAGTC GTTTATTTCC GTTATACTCT CCGCCGACAC CGGAGATAAA CCGGCGGTTC GTAAGCATTG TATTCACTTG CTCTCTGTTT TATCAGTTTC TCTTCCTCTC AATTCTCTGT CTCCTTTCCT CTCTAAGATC CTCACTCGCA TCACGAGACG TCTCCGTGAT CCCGACTCTT CGATTCGATC AACTTGCGTC GCGGCTGTGT CGGCGATCTC TTCACGTACG ACGAAGCCTT CGTTTTATTC GGCGTTTATG AAGCCGTTAG CGGATACGCT TTTCACTGAG CAAGAGGTTA ATGCGCAGAT CGGAGCTGCG CTTTGTCTCG CGGCGGCGAT TGATTCGGCG TCTGATCCGG ATCCGGTTCG GTTAGGGCAG ACACTTTTGC CTAGACTTGA GAAGCTGGTG AAGTGTAATG CGTTTAAGGC GAAATCGGCG GGAGTTGTTG TGATCGGAAG TGTGATTGGT GCTGGTGGTT TGTCTGGAAC CACTGTGAGC TCCGGTGGAT TGAAAGGACT TGTGGAATGC TTATTGAGCT TCTTGGTTAG TGAAGATTGG GCCGCGAGGA AAGCAGCTGC TGAAGCTTTG GGGAGGTTAG CTACAATGGA GAGAAATGAG TTAGGTGAGT TCAAGGCTAA ATGCTTGAAG ATCTTTGAAA GCAGGAAATA TGATAAGGTG AAAGCTGTGA GAGAGGTGAT GAATCAGATG ATGGAGGCAT GGAAACAGGT TCCAGATTTA TCAGAAGAGG TTTCTCCACC CAGATCTAAT GCTTCTTCTA AAGGTGATGC AAGTGATGGA CGATATCCTT CAGGATCTAG AGTTGCTTCA ACACCTGCTA AATCAAGAAC TCATCTAGTT AACAGATCGA CTCCACCCAG GAGTTCACTA GCCACCACGG CTAGGAAACA GGCTAGCAGA AAAAGCATTG ATCAGAAGAA AACCAGTCTA ACGGCATCAC ATACAAAACC AAATGTGAGG AGAAGATTGG ACTGGAAAGC TGGAGGAGCT AGTATTCCCA CTGGTGTGCC TCTTGAAGAC GAACAACATC GTGACCATAA CGAGAATGCA AAGGAAACGA GTCATTCTAG TCACAATACG ATTCAGAAGC TAGGAGGTGT TTCCAGTTCT CTTAATGGCA ATATCCCACC ATCCGGTGCT ACAATGGTAA CAGGGCATCA TGTCTTGTCT GAAAACCCAA ATAGTAGTAA CTGCAAAGGG CTTGAAGATA TATCTCTGCT CCGTAATCAG CTTGTTCAGA TTGAACAACA GCAAGCCAAT CTAATGGATC TTCTTCAGAG ATTTGTCGGA AGCTCACAAC ACGGAATGCG CGGTCTGGAA ACACGAGTTC ACGGCTTAGA ACTTGCTCTG GATGAAATAT CTTATGACTT GGCGGTTTCA AATGGGAGAA TGAGTAACGG TTCAAGCAGA AACAACTGTT GTCTCCTTCC TTCTGGAAGT TTCATCAAAT CTAAATTCTG GAAGAAACAC GATTCGAAGT ATTCAGCATC GAGAATGTCC ACTTATAGGA ACAGAAATGC AGAAACCACA GGGATACAAA ACTCGAGGCA TCGGTTTAAT GGCTCTCCTG GATTTATAGT CAACCCATTA GCTGAAATTC GACCAGATAA TGGATCTGCA GGTAAACAAG CTGTATGCCT CACAATTGAG GGACGAAGAG AAACAAAACA TTGA 
Length1824
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19304020.. 19306262
Download Sequence
A.thaliana
AGI-codeAT5G62580.1
DescriptionARM repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
13.6015 Ahg487523 Eukaryotic aspartyl protease family protein
21.4942 Ahg495659 FASCICLIN-like arabinogalactan 1
26.096 Ahg492489 TRICHOME BIREFRINGENCE-LIKE 24
26.7769 Ahg924488 glycosyl hydrolase 9C2
31.7017 Ahg494383 GDSL-like Lipase/Acylhydrolase superfamily protein
35.9444 Ahg495241 subtilase 1.3
40.4969 Ahg471757 CYCLIN A2;3
40.7431 Ahg901436 FASCICLIN-like arabinogalactan protein 16 precursor
44.6318 Ahg486566 FASCICLIN-like arabinogalactan-protein 10
50.1099 Ahg496451 tubulin beta chain 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression