Detail



ID : Ahg918215

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|918215|Al_scaffold_0008_2966
Sequence
ATGGCTACTC GGAGAGAAGT ACGGTGCCAG TGCGGCAGAC GGATGTGGGT TCAACCAGAC GTCCGTACTG TCCAATGCTC AACCTGCCAC ACCGTCACGC AGCTCTACTC GCTCATGGAC ATAGCGCGCG GTGCAAACCG CATAATTCAT GGGTTTCAAC AGCTACTTAG ACAACATCAA CCGCAACATC AATATCATGA ACAACAACAA CAAATGATGG CTCAACCGCC ACCGCGGCTG CTTGAGCCCC TTCCCTCGCC GTTTGGGAAG AAGAGAGCAG TTTTATGCGG CTTGAACTAT AAGGGAAAAA GTTATAGCTT GAAAGGTTGC ATCAGTGATG CTAAATCCAT GAGATCTTTC TTGGTTCAAC AAATGGGTTT CCCTATTGAC TCTATTCTCA TGCTCACAGA TCATAGATCA GTCAGAGCTT ACAAAGGAAC AGATGGTGGA GCAGCTTTCT GTTTCAGTGC TTGTGACGAT GATGAAACCA GTGGTTACAC TCCTGTATTC ACGGGGAAGA ACACAGGAGC CATGACTTAT AGCTTTATAA AGGCGGTGAA GACCGCTGGA CCAGCCCCCA CATATGGCCA CCTGCTTAAC CTTATGTGTT CTGCAATACG AGAGGCCCAG TCTCGTCTCG CCTTTAACGG GGACTACGCA AGCTCTGATG CATCCGCGGA GCCACTGCTA ACATCATCTG ATGAATTCGA CTTGTACGCG ACAAAGTTTG TACTCTGA 
Length738
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20093515.. 20094952
Download Sequence
A.thaliana
AGI-codeAT5G64240.2
Descriptionmetacaspase 3
TAIR curator summary
Alias[AtMC3][AtMCP1a][MC3][MCP1a][metacaspase 3][metacaspase 1a]
Gene coexpression
MR
MR Locus Description
57.4282 Ahg927040
71.5821 Ahg941324
78.1665 Ahg931779 glycine-rich protein 2B
84.947 Ahg932858
86.7871 Ahg339396 poly(A)-binding protein 5
87.2697 Ahg492961 AtS40-3
93.3006 Ahg891767 Vesicle transport v-SNARE family protein
94.1541 Ahg473386 Domain of unknown function (DUF313)
96.2341 Ahg930388 dual specificity protein phosphatase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression