Detail



ID : Ahg918339

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|918339|Al_scaffold_0008_3090
Sequence
ATGGCAGAGA CAGAGAATCT AGAACTGAGT CTTTTATGTA CAGAGACCAA CGTTGATGAT GATGAAGACA AGGGCATGAT TGTTGACAAA ACTCCGTTTC CTCAGATGGG TTTATCTCAA TCGGAGAGTG AAGAGTTTAT CAGAGAGATG GTGGAGAAGG AGAAGCAGCA TTTGCCAAGT GATGATTACA TCAAGAGACT CAGAAGTGGA GATTTGGATT TGAATGTTGG AAGAAGAGAA GCCCTCAATT GGATTTGGAA GGCTTGTAAG GAACACCAGT TTGGACCATT GTGTTTTTGC TTATCAATGA ACTACTTGGA TCGATTCTTA TCGGTTCATG ATCTGCCTAG TGGCAAAAGT TGGATATTGC AGTTGTTGGA TGTGGCTTGT TTATCCTTGG CAGCCAAAAT TGAAGAAACT GAAGTTCCAA TGTTAATTGA ACTTCAGGTT GGAGATCCTC AGTTTGTGTT TGAGGCGAAA TCAGTCCAAA GAATGGAACT TTTGGTGCTG AACAGATTGA AATGGAGATT GAGAGCAATA ACTCCATGCT CATACATAAG ATATTTCTTG AGAAAGATGA GTAAATGTGA TCAAGAACCA TCCAACACAT TGATATCCAG ATCACTACAA GTGATAGCCA GCACAACCAA AGGTATTGAC TTTATGGAGT TTAGACCTTC TGAAGTTGCT GCTGCTGTGG CACTTTCTGT TTCTGGAGAA TTGCACACAG TACACTTTGA CAACTCTCCT CTTTTCTCAC TACTTCAAAA GGAGAGAGTG AAGAAGATTG GGGAAATGAT ACAGAGTGAT GGTTCAGGCT TATGTTCACA AACACCCAAT GGGGTTTTAG AAGTATCAGC TTGTTGTTTC AGCTTTAAGA CCCATGATTC TTCTTCTTCT TATACACATC TTTCTTAG 
Length918
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20599230.. 20601333
Download Sequence
A.thaliana
AGI-codeAT5G65420.3
DescriptionCYCLIN D4;1
TAIR curator summaryEncodes a D-type cyclin CYCD4;1 that physically interacts with CDC2A and is expressed during vascular tissue development, embryogenesis, and formation of lateral root primordia. Its expression is upregulated early during germination.Involved in stomatal cell lineage proliferation in the hypocotyl.
Alias[CYCD4;1][CYCLIN D4;1]
Gene coexpression
MR
MR Locus Description
15.6844 Ahg948342 Protein of unknown function (DUF679)
32.5883 Ahg930194 IQ-domain 5
33.6452 Ahg905518 high chlorophyll fluorescence 153
35.2278 Ahg931330 Protein of Unknown Function (DUF239)
54.4151 Ahg487719 RING/FYVE/PHD zinc finger superfamily protein
70.5266 Ahg473664
81.7924 Ahg919766 F-box family protein
89.4427 Ahg323188 UDP-Glycosyltransferase superfamily protein
90.111 Ahg939179 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression