Detail



ID : Ahg918927

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|918927|scaffold_100208.1
Sequence
GATAGTCTAT CTCTGGAACT ATGTTCCTCC TAATGCAGAA CCTGTTTATG GAGCCATTCA TCCTCAATCT TGAAGAATCT TCTATGTTGA GTTCCCTCAG AAGTTTGAAG GTATTGGACC CAAATGATCG TTATGCAAAC CACAACACTG TCTTCTTTGA TGTTAGTATG AAGTTGGCAA GTCTTGTATC TACAAGAAAG ATCCATTAAT AGTGGGATTG CTACCGGGG 
Length229
Protein Sequence
Protein Residue
Map Locationscaffold_1: 688229.. 688525
Download Sequence
A.thaliana
AGI-codeAT1G02730.1
Descriptioncellulose synthase-like D5
TAIR curator summaryEncodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems.
Alias[ATCSLD5][CSLD5][CSLD5][SOS6][cellulose synthase-like D5][CELLULOSE SYNTHASE LIKE D5][SALT OVERLY SENSITIVE 6]
Gene coexpression
MR
MR Locus Description
26.0576 Ahg931060
37.51 Ahg900245
39.4968 Ahg914717
40.0749 Ahg478121 Pectin lyase-like superfamily protein
40.7431 Ahg331170
44.0454 Ahg474736
47.244 Ahg929733 ROTUNDIFOLIA like 20
49.8397 Ahg892531 LOB domain-containing protein 33
65.1767 Ahg938140
67.1714 Ahg487944 Exostosin family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression