| Annotation |
|---|
| Description | jgi|Araly1|918933|scaffold_100214.1 |
| Sequence |
TTAAATTTGT TAACACTCTT TTAAAAGAAC AAAAAAAGCA AAAAAATAAT AAAGATATTA TCACCATGGC TAACGCAAGA AGTTTGGTCG CCGAGGCAAA CAATATTAAC GTAGGTTCAT TGATTCTAAT GGCCTTGGTG TTTGGTTCTT GCGTGGCTAA TGGTGAATAT CTCGGCGGCC GCCGTGGTCT CGCCGCTAAT TCCGGTAACC CCACAGTCTA TGATATTACT AAGTTTGGAG CCGTAGGAGA TGGTTCCACC AATACTTTTA AGGCGTTTTT GAACACATGG ATCCAAGTGT GTGATAGTCC AGTACCAGCA ACGCTACTAG TTCCTAAGGG ACAATTTTTG GCTGGTCCAG TCATTTTCGC CGGTCCATGC AAGAGCAAAG TGACCGTCAA TGTTCAAGGC ACAATCATCG CTACGACCAG CGGGTACGCA ACTCCCGAAT GGTTCTTGTT CGAACGTGTC GACAATCTCG TCCTCACCGG AACCGGCACA TTCCACGGGA AAGGTGAAGC TGTCTGGAAA GCAGATGGTT GTGGCAAAAA GGTCCAATGC AATCTTCCTC CAACGTCTCT CAAATTCAGG AACATGAAAA ATGTTGAAAT CAATGGCATA AGCTCGGTGA ACGCAAAGGC CTTCCACATG TTCTTAGTCA AAACTGAGAA TGTTAACATC CAAAACATTA AGCTTATCGC ACCTGCTGAA AGTCCCAACA CCGATGGTAT CCATTTGAGC AATGCAGACA ACGTTAGCAT CCTCGACAGT ACCATCGCGA CTGGAGACGA TTGTGTTTCA GTCGGTCGTG GCTCCAACAA CGTAACCGTC GAACGTGTGA TTTGTGGTCC AGGACACGGT TTAAGTGTCG GTAGTCTTGG TAAGTACAAG AACGAGGAAG ACGTTAGCGG AATCCACGTT AACAACTGCA CGATGGTTGA GACCGACAAT GGTCTTAGGA TCAAGACATG GGGTGGTTCA GATCCAAGCA AGGCTGTGGA CATTAAATTT GAAAACATCA TCATGCAGAG TGTCAAGAAC CCAATTATCA TTGATCAAAA CTACGGTTCA AGAGGCGGAG ATTCACAAGT TGCTATAAGT GATATATTGT TCAAGAACAT TAGAGGAACA ACAATTACAA AAGATATCGT TCAGATTATG TGTAGCAAAT CGGTGCCGTG CAAAGGAGTC AACGTTGTTG ACGTGAACTT GAACTATGTA GGCAAGACAG GAGGAGAGAA GAAGTCGTCG TCAGGCGGTT TGGTGGGAGC TCTTTGCGAT AACGCTAATG TTATATTTGG TGGAAAACTT AGCTTCCCTA TGTGTCCCAA ATAAGCTTTT TGGTATAAAA AAATTT |
| Length | 1356 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 703570.. 705197 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G02790.1 |
| Description | polygalacturonase 4 |
| TAIR curator summary | encodes a exopolygalacturonase. |
| Alias | [PGA4][polygalacturonase 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg898182 | cell wall invertase 2 |
| 3 |
Ahg483878 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
| 3.87298 |
Ahg487574 | Pectin lyase-like superfamily protein |
| 4 |
Ahg483877 | Plant invertase/pectin methylesterase inhibitor superfamily |
| 6.16441 |
Ahg471616 | Pectate lyase family protein |
| 15.4272 |
Ahg949519 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
| 18.3848 |
Ahg477851 | Plant invertase/pectin methylesterase inhibitor superfamily |
| 21.0713 |
Ahg478120 | Pectin lyase-like superfamily protein |
| 25.6905 |
Ahg485310 | |
| 28.2666 |
Ahg331754 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|