Detail



ID : Ahg478120

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478120|fgenesh2_kg.3__821__AT3G07820.1
Sequence
ACAAAATAGA ATAACAAATA GTAATAGTAG TAATATTTTA TTTTTTTTTG GGAAAAATGG GTGCATATTT TGGAGTTTCT ACCATATTAA TTATCTGTTT GTTGGGAATT TCAGCCAATG CTGAGGTATT CACCATTGGT TCGTCATCAG GTTCTGATAT TACTCAGGCC CTTCTGAAAG CATTCACATC GGCATGCCAA TCTTCGTCAC CAAGCAAAGT GGTGATCCCA AAAGGAGAGT TCAAGCTTGG TGAGATCGAG ATGAGGGGTC CATGCAAAGC TCCCGTTGAG GTCACCCTTC AAGGTACTGT CAAAGCTGAC GGTAACGCTA TCCAAGGAAA GGAGAAATGG GTCGTCTTCG GCAACATTGA TGGCTTTAAG TTGAACGGAG GTGGAGCCTT CGACGGTGAA GGAAACTCTG CGTGGAGGGT CAACAACTGC CACAAGACCT TCAACTGCAA GAAACTTCCC ATCAGTATAA GGTTTGACTT CGTGTTGAAC TCTGAGATCA GAGACATATC CTCGATCGAT GCAAAGAATT TCCACATCAA CGTGTTGGGA GCCAAGAACA TGACCATGGA TAACATCAAG ATCATCGCTC CAGAGGAGAG TCCCAACACT GATGGGATCC ATTTGGGAAG AAGTGACGGA GTCAAGATCC TTAACTCTTT CATCTCCACC GGAGACGATT GCATCTCCGT TGGAGATGGG ATGAAGAACC TTCACGTGGA GAAAGTTACA TGCGGTCCAG GACACGGAAT CAGTGTCGGA AGCCTTGGAA GGTACGGACA CGAGCAAGAC GTCAGCGGCA TTAAGATCAT CAACTGCACT CTCCAAGAGA CTGACAACGG GTTGAGAATC AAGACATGGC CCTCTGCAGC TTGCTCCACC ACCGCCTCGG ATATCCATTT CGAGGATATC ATCGTCAAGA ACGTTAGCAA CCCAATCCTC ATCGACCAAG AGTACTGCCC TTGGAACCAA TGCAACAAGC AAAAAGCATC AACAATTAAG TTGGTGAACA TAAGCTTCAA GAATATCAGA GGAACATCAG GGAACAAGGA CGCGGTGAAG CTACTTTGCA GCAAGGGATA TCCGTGCCAG AACGTGGAGA TTGGAGACAT TGATATTAAG TACAATGGAG CCGATGGTCC AGCGACTTTC CAATGTTCAA ATGTCAGTCC CAAACTCTTG GGATCTCAGA GCCCTAAAGC ATGCAGCGCT CAAGCAGCCT AAATGTAGAA GCTCTAAAAC AATTAATTAA TCAAACACCC ATTCATTTTT TATATGTATT TCTTCTATAC ATTAACTATA TTTGATGTAT GCTCTCATTC TATTTAATTC AACAATGAAT GCATC 
Length1355
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3079320.. 3080923
Download Sequence
A.thaliana
AGI-codeAT3G07820.1
DescriptionPectin lyase-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg486726 VANGUARD 1 homolog 2
5.91608 Ahg487574 Pectin lyase-like superfamily protein
13.4907 Ahg494865 Pectin lyase-like superfamily protein
19.4422 Ahg919261 cation/H+ exchanger 23
20.9762 Ahg358371 Pectin lyase-like superfamily protein
21 Ahg488975 Leucine-rich repeat protein kinase family protein
21.0713 Ahg918933 polygalacturonase 4
24.7992 Ahg944327 zinc finger (C2H2 type) family protein
25.6905 Ahg898182 cell wall invertase 2
26.7208 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression