Detail



ID : Ahg919771

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|919771|scaffold_101052.1
Sequence
TACACATAAG CATTGACGGG GATGATGACT ATATATATAG ATGTCATTTA CTCCTCTCTC AAGCTTCCTT TCTCACAAAT GAAAAGCTTC AACACAGAGC ACAATCCCTC GGCGGTGGAG TCCGGGAATA GATTCGACGA CGATGGTCGG GAGAAGAGGA CGGGGACGTT TATGACGGCG AGCGCCCACA TAATCACGGC GGTTATAGGC TCCGGTGTGT TGTCCTTGTC TTGGGCAATA GCACAGCTTG GTTGGGTGGC AGGAACCGTA ATTTTGGTCA CTTTTGCCAG CATTAATTAC TACACATCCA CCATGCTCGC CGACTGTTAC CGATCTCCCG ACACCGCACC GGGAACACGG AATTATACAT ACATGGACGT CGTCCGAGCT TACCTTGGTG GTAGGAAAGT GCAGTTATGT GGACTGGCAC AGTACGGAAG TCTCGTAGGG GTCACTATTG GTTACACCAT CACTGCCTCC ATAAGCTTAG TAGCGATCGG AAAAGCAAAT TGTTTTCATG ACAAGGGACA TGATGCGAAA TGTTCCTTGT CGAATTATCC ATCCATGGCA GCATTTGGGA TCGTCCAACT TATGCTCAGC CAGATCCCTA ATTTTCACAA ACTCTCTTTC CTCTCCATCA TCGCCACGGT TATGTCCTTC TGTTATGCGT CTATCGGAAT CGGCTTATCC ATCACCACTG TGACAAGTGG GAAGGTTGGT AAGACGGGGC TGACGGGTAC GGTGGTTGGG GTGGACGTAA CTGCGTCTGA AAAACTGTGG AGATCGTTTC AAGCCGTTGG AGACATTGCA TTCTCATATG CTTATTCCAT TGTTCTCGTT GAGATCCAGG ATACATTGAA ATCAACCCCA CCGGAGAACA AAGTGATGAA AAAAGCAAGC CTTGCTGGAG TCTCCACGAC AACTGTTTTC TACATCTTAT GTGGTGGCAT CGGATATGCT GCATTCGGAA ACAAAGCCCC TGGTGACCTC CTTACAGACT TTGGTTTTTA CGAACCTTAC TGGCTCATCG ATTTTGCCAA TGCGTGCATC GTTCTCCACC TAATTGCAGC TTATCAGGTG TTTGCGCAAC CAATTTTCCA GTTTGTTGAG AAGAAATGCA ACAAAAAGTG GCCAGAAAGC ATTTTCATCA CCAGTGAACA TTCGATGAAT ATACCATTGA TTGGAAAATG TACCATCAAC CTTTTCAGAC TATTGTGGAG GACATGCTAT GTGGTTTTGA CTACAGTTGT AGCAATGATA TTCCCCTTCT TCAATGCAAT CTTGGGTTTG CTCGGGGCAC TCGCGTTCTG GCCACTCACA GTTTATTTTC CGGTGGCAAT GCACATTGAG CAGGCAAAGG TTAAGAAGTA TTCTCTTCGA TGGATAGGGT TGAAACTCCT TGTATCGCTT TGTTTGATTG TTTCACTCCT AGCCACAATA GGATCCATTG TCGGCTTGAT AACTAGTGTC AAGGCATACA AGCCTTTCAA CAATTAATAT TAGTATATAT ACTGTAC 
Length1517
Protein Sequence
Protein Residue
Map Locationscaffold_1: 3676910.. 3683246
Download Sequence
A.thaliana
AGI-codeAT1G10010.1
Descriptionamino acid permease 8
TAIR curator summaryEncodes a high affinity amino acid transporter that is probably responsible for import of organic nitrogen into developing seeds. One of eight gene family members that encode amino acid permeases. Most closely related to AAP1 (75%) identity.
Alias[AAP8][ATAAP8][amino acid permease 8]
Gene coexpression
MR
MR Locus Description
10.583 Ahg943595 copper ion binding;electron carriers
11.1355 Ahg921734 homolog of Brassica campestris pollen protein 1
11.4891 Ahg952263 copper ion binding;electron carriers
12.9615 Ahg487283 Plant invertase/pectin methylesterase inhibitor superfamily
23.3452 Ahg477819 MIRO-related GTP-ase 3
25.0998 Ahg919270 Pectin lyase-like superfamily protein
37.2156 Ahg478720 SKU5 similar 11
37.8153 Ahg900325 myb domain protein 81
43.7493 Ahg918706 RmlC-like cupins superfamily protein
44.8999 Ahg901222 homeobox-3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression