Detail



ID : Ahg920163

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920163|scaffold_101444.1
Sequence
CCAAACCCTA GAAACCAAAA AATGGAAGAA GCCCTAAGGA ACTTCACCGA ATCTAGCCAC TCACCCGACC CAAATCCTTT CACGAAAAAC TTCACTGATG CTACAGCTTC ACCAGTTAGC CGCAACCGCA AACCGTCTTC AAAAGATACC ACAGTAACCA TCGCCGGAGT TGGCAGCAGC ACGACGAGGT ACCGCGGCGT ACGCCGGAGG CCGTGGGGAC GATATGCGGC TGAGATACGT GACCCAATGT CAAAGGAAAG ACAGTGGCTC GGAACATTCG ACACGGCGGA GCAAGCCGCT TGTGCTTACG ACTCTGCGGC TCGTGCCTTT CGTGGAGCTA AGGCTCGTAC CAATTTTGCT TATCCGACAG CTGTTATTAT GCCTGAGCCA AGGTTTTCCT TTTCTACCAA GAAATCTCTG TCGTCCCCCC GTTGTCCTCT TCCTTCTCTA CCGTTAGATC TCTCTACCCA GGACTTTTTC GGTGCACCGG CAGCGCAGAG GATTAATACA CAGTCTATCT TCTTACGTGA CGCCTCGTGT TCCTCTCGTA AAACGACTCC GTATAACTCT TTCAACGTTT CATCTTCTTC TTACTCAGCA CCGAAGACGG CATGCTTTTC ATCTTCCGAC AACGAAAACA ACGAGTCGTT TTTCCCTGAA GAATCTTCTG ATTCTGGTCT TTTACAAGAG GTCGTTCAAG AGTTCTTGAA GAAGAATCGC GGCACTCCTC CGCCACCAAC ACCACCGCCG GTGACCAGCC ATACTCATAA CTCTGGTGAT TTCTCTGCTC TCACTCTCTA CTCTGACAAT ATGTTTCAAG ACACGAAGGA GTCCCTATCG TCGAAACTAG ATCGCTTCGG GAATTTCCAA GCTAATGACT CCGGTTATTT CGACGGCGTA AGCGCCGCCG CAGACGGTGG TTCAAACGAG TGGGGGTATC AAGAAATGTT GATGTACGGA ACTCAGTTAG GCTGTACTTG CCGGAGATCG TGGGGATAGC TAGATCTTCA TCATGATTAT 
Length1020
Protein Sequence
Protein Residue
Map Locationscaffold_1: 5136828.. 5137861
Download Sequence
A.thaliana
AGI-codeAT1G12980.1
DescriptionIntegrase-type DNA-binding superfamily protein
TAIR curator summaryEncodes an AP2/ERF protein, is expressed in a subdomain of meristem stem cells, in lateral organ anlagen, and transiently in the distal domain of organ primordia. It is a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ESR1). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. Can confer cytokinin-independent shoot formation and causes severe meristem defects when overexpressed in Arabidopsis root explants. Involved in controlling embryogenesis and embryo patterning by interaction with PHAVOLUTA.
Alias[DRN][ESR1][DORNROSCHEN][ENHANCER OF SHOOT REGENERATION 1]
Gene coexpression
MR
MR Locus Description
5.19615 Ahg945048
13.0384 Ahg907764
13.5277 Ahg491913 cruciferin 3
20.7846 Ahg940633 Major facilitator superfamily protein
22.2486 Ahg490356
23.6854 Ahg348240 Eukaryotic aspartyl protease family protein
24.8998 Ahg914791
35.7491 Ahg932829
43.2666 Ahg490718 other RNA
52.2303 Ahg916656 cytokinin oxidase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression