Detail



ID : Ahg348240

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|348240|fgenesh1_pg.C_scaffold_5001632
Sequence
ATGATTAGGA GTAGCGGGAA TTTGAGATGG ATGTTTCAGT TTGGATTCCT CTGTATTATG AGTTTGGGAT TGGCTTCTTC TGTTTCAGGA TCACTCTCCT TTGAAATCCA CCATAGATTC TCAGAGCAAG TCAAAACGGT TCTAGGTGGC CATGGCTTGC CTGAAATGGG CAGCCTCGAC TACTACAAGG CGTTGGTTCA CCGTGATCGA GGTCGGCGGC TAACATCCAA CAACAATCAG ACAACTATTT CTTTCGCTCA AGGCAACTCC ACCGAAGAAA TCAGTTTGTA TGATCAAAAT TTGGCACCTC CTCTGTTTTT TAATTATCTG CATTATGCGA ATGTGACGAT AGGGACACCG GCTCAATGGT TCTTGGTGGC ATTAGACACA GGAAGTGATT TGTTTTGGTT ACCTTGCAAT TGCAATTCCA CTTGCGTACG GAGTATGGAG ACTGACCAAG GCGAGACACA CATGAATGCA CAGAGGATAA GGCTCAACAT CTACAACCCA AGCATATCAA CATCAAGCTC AAAGGTTACG TGCAATAGCA CACTCTGTGC ATTAAGAAAC AGATGCATTT CTCCGCTCAG CGATTGTCCT TACAGAATCC GATATCTCTC GCCGGGAAGC AAAAGCACAG GTGTGTTGGT GGAGGATGTG ATCCACATGA GCACAGAAGA AGGAGAAGCT AGAGATGCTC GGATCACATT CGGATGTAGT GAGACCCAAC TAGGGTTGTT CCAAGAAGTG GCTGTAAATG GTATAATGGG ACTTGCAATG GCCGACATAG CGGTTCCAAA CATGTTGGTT AAAGCCGGTG TGGCGTCAGA CTCTTTCTCA ATGTGTTTTG GTCCTAATGG GAAAGGAACA ATCAGTTTCG GAGACAAAGG TAGCTCAGAC CAGCATGAGA CTCCATTGGG TGGCACCATC TCTCCGCTGT TTTACGATGT GAGCATCACC AAATTCAAGG TAGGAAAAGT GACGGTGGAA ACAAAATTCA GCGCGATATT TGACTCTGGA ACCGCGGTTA CTTGGCTGCT CGATCCGTAC TACACTGCTC TAACAACAAA CTTTCATCTC TCTGTACCAG ACAGACGACT TCCAGCAAAT GTGGATAGCA CCTTTGAGTT TTGCTACATT ATTACATCAA CCTCAGATGA AGAGAAGCTT CCTTCAATTA GCTTTGAAAT GAAAGGAGGA GCTGCTTATG ATGTTTTCAG CCCCATACTT GTCTTCGACA CCTCCGATGG TAGTTTTCAA GTCTACTGCT TGGCCGTTTT GAAGCAAGAT AAAGCTGATT TCAACATCAT CGGACAAAAC TTCATGACCA ACTACAGAAT CGTCCATGAT CGCGAGAGAA TGATCTTGGG ATGGAAAAAA TCCAATTGTA ATGATACTAA CGGTTTCACG GGACCTACCG ATTCACCGCC ATCGCTGCCG CAATTGCCGT CTCCAAGAAC CATTAACCCT TCCAGCCGTT TGAACCCTCT GGCTGCTTCT TCACTTTTCA TCATTTGCTT CATTTCTTTT ATATGTTTGT GA 
Length1542
Protein Sequence
Protein Residue
Map Locationscaffold_5: 14743799.. 14746363
Download Sequence
A.thaliana
AGI-codeAT3G51360.1
DescriptionEukaryotic aspartyl protease family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.16228 Ahg942579 copper ion binding;electron carriers
13 Ahg497075 transposable element gene
15.2315 Ahg476744 GDSL-like Lipase/Acylhydrolase superfamily protein
18.1384 Ahg470353 Zinc finger C-x8-C-x5-C-x3-H type family protein
20.1246 Ahg944019 arabinogalactan protein 3
23.6854 Ahg920163 Integrase-type DNA-binding superfamily protein
29.3598 Ahg947612
38.6523 Ahg949069 transposable element gene
39.2428 Ahg315689
44.3621 Ahg920990
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression