Detail


ID : Ahg920264

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920264|scaffold_101545.1
Sequence
CACAAGATCG GAAAATATTT CATGCGGGTT ATCCCGAGTT CATTACTCTC ACATGTGAGA GGACTGATTC GAAGAGGACC CTCTTCGCGA TGGTACGTGG TTCCTGCACT TTCCCGGACG AACATTACAA TCTCACACTC AGAGCAAGTG AAAGAAGGTA CCTTTGATTA TAAAGCATTG GAGTTAAATG AAATTGGGGT TCTTCGAGTA TTGAATAGTA TGAAGGATGA TCCTTATCTT GCTTTATCGT TTCTCAAACG AATTGAAGGA AATGTGGCTT TGCCTAGTGT CCAAGCTTAT GCAACTGTTA TCAGAATTGT TTGTGGTTGG GGTTTAGATC AGAAACTGGA TACTTTTCTA GTGGAACTCG TTAGAAAAGG AGATGAGGGA CGCGGTTTCA GTGTTATGGA TTTGTTAAAG GCCATTGGAG AAATGGAGCA GTCATTGGTG TTGTTGATAC GGGTCTCCAC TGCATTGGTT AAAGCCTATG CTAATCTTGA AATGTTTGAG GAAGCTATCG ATATTTTTTT TCAAACTTAT CATTCCCTAG GACGTGCTCC GGATATAAAG GCATTGAATG TTTTGATGAA CCGTATGATT GCTTCTGGGA GAACTGATAT GGTGGTTGGT GTTTTCTGGG AAATAGAGAG GCTGGGTTTG GATGCGGATG CACATACATA TGTGCTGGTG GTTCAAGCAT TGTGTAGGAA TGAGGATAAA GAAGGGGTAG ATAAGCTTCT TATTAGACTG TTAAACTCAG AGACGAGGAA TCCTTGCGTG TTTTATTTGA ATTTCATTGA AGGACTATGT TTAAATCAGA TGGCAGGCAT GGCGTATCTT CTACTCCAAC CATTGAGGGA AGTGAATATT CTGGTGGATA AGAGTGATCT TGGAATTGCA TATCGCAGAG TGGTTCGTGG TTTATGTAAT GAGATGAGAA TAGAAGATGC TGAAAAAGCT TTTCTTGACA TGGAGGAGCA CGGGATTGAT CCGGATGTCT ATGTTTACTC GGCGATAATT GAGGGACATC GCAAGACTAT GAATATACCT AAAGCTTTTG ATATTTTTAA CAAAATGGTG GAGAAAGGAA AAAGAATAAA TTGTGTGATT GGAAGTTCGA TCCTTCAGTG CTGTTGTCAG ATGGGAAATT TCTCAGGAGC TTATGATCTG TTTGAAGAGT TTAGAGAGTT GAACATTCCT CTTGATAGGG TTTGCTACAA TGTTGCATTT GATGCTTTGG GAAAGCTTGG CAAAGTAGAA GAAGCTATTG AGCTGTTCCG AGAAATGACG GGTAAAGGAA TAGCTCCTGA CGTCATCAAC TACACGACGT TGATAGGTGG TTGCTGTCTA CAAGGTAAAT GTTCTGATGC TTTTGATTTG ATGATTGAAA TGGACGGATC AGGTAAAACA CCTGATATTG TTATATATAA CGTACTTGCT GGTGGATTGG CTAGGAATGG TCTTACCCAA GAGGCACTTG AAACTTTGAA ACTGATGGAA GATCGGGGGG TAAAACCCAC TTATGTTACA CAAAATATGG TCATTGAAGG CCTGATTGTT GCAGGTAAAC TAGACAAGGC TGAAGCTTTC TATGAGAGTT TGGAACATAA GTCTCGGGAA AATGATGCAA GTATGGTTAA AGGCTATTGT GAAGCTGGCT GTCTTGATCA GGCATTTGAA CGATTCATTA GACTGGAATT TCCTCTGCCC AAGAGTGTGT ATTTTACTCT ATTCACTAGT CTTTGCTCTG AGAAGAATCA TATCAGCAAA GCTCAAGACT TACTGGATAG AATGTGGGAA CTTGGAGTCG AACCTGAGAA GAGCATGTAT GGAAAGTTAA TTGGTGCATG GTGTCGAGTT AATAATGTGA GAAAAGCCCG GCAGTTTTTT GAAATTTTAG TTACTAATGA GATTATCCCT GATTTGTTCA CTTACACAAT CATGATTAAC ACCTATTGCC GGTTAAACGA GCTGAAGCAA GCCTATGCTC TTTTTCAAGA CATGAAGAGG AGAGATGTCA AGCCTGATGT GGTAACATAC ACAGTTTTAC TCAATAGCAA TCCAGAGTTG GATATGAAGA GGGAAATGGA AGCCTTTGAT GTTAAACCAG ACGTTGTCTT ATACACAATC ATGATTAACA GATATTGCCA GTTAAACGAC GTGAAGAAAG CCTATGCTCT TTTTAAAGAC ATGAAGAGGA GAGAAATCGT ACCTGATGTG GTAACATACA CAGTTTTGCT CAAAAACAAT CCAGAACTGG ATCTTACGAG GGAAATGAAA GCCTTTGATG TTAAACCAGA CGTTTTCTAC TACACAGTTT TGATTGATTG GCAGTGCAAG ATTGGTGATC TTAGAGAGGC GAAAGGAATC TTTGATCAAA TGATCGAAAG TGGGGTGGAT CCTGATGCTG CACCTTACAC AGCACTAATA GCTGGTTGTT GTAAGATGGG AAATCTTAAA GAGGCGAAAA TGATCTTTGA TCTGATGATT GAAAGTGGGT TAAAGCCTGA TTTTGTGTCT TACACAACAC TAATAGCTGG TTTTCGTAGG AATGGGTTTG TACGTAAGGC ATTCACACTT ATGAAAGAGA TGTTGGAAAA GGGGATTAAG CCGACTGAAG CTTCCCTGTC TGCAGTACAC TATGCTAAAT CAAAGGCCAA GGGACTCCGA TGATGATTAA GAGCCTGTAT CTA
Length2693
Protein Sequence
Protein Residue
Map Locationscaffold_1: 5537114.. 5539806
Download Sequence
A.thaliana
AGI-codeAT1G13800.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias[FAC19][embryonic factor 19]
Gene coexpression
MR
MR Locus Description
10.198 Ahg486626 Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor
11.0454 Ahg484896 Ribosomal L18p/L5e family protein
31.3688 Ahg920552 Tetratricopeptide repeat (TPR)-like superfamily protein
36.3731 Ahg470396
38.8844 Ahg332265 Polymerase/histidinol phosphatase-like
42.5911 Ahg483334 vascular plant one zinc finger protein 2
44.6318 Ahg477061 Mitochondrial transcription termination factor family protein
45.0777 Ahg476030 Prolyl oligopeptidase family protein
48.0625 Ahg480596 Pentatricopeptide repeat (PPR) superfamily protein
56.2317 Ahg924813 Mitochondrial transcription termination factor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression