Detail



ID : Ahg920600

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920600|scaffold_101881.1
Sequence
TCAGAGTTTA AGCAGACGAC ATGGATGTTG AGAACTCTGT CAAAGAGAAG CAGAGGAACT CCGATAGGAT AAGCAATTTA CCTGATTCTT TGTTATGTCA GATTCTCTCA GATCTCTCCA CAAAAGAATC GGTTTGCACA AGCGTTTTAT CAAAACGATG GAGAAGTCTC TGGTTACATG TTCCTGCACT GGATTTGGAT TCCAATAACT TCCCAGATGA TGATGTTTTT GTGAGTTTCG TAAACAGGTT TCTGGTTTCT GAAAATGAGC AACACTTGGA GAGATTCAAG TTGATCTATG AGGTTAATGA GCATGATGCT TCTCGGTTCA AGTCTTGGAT CAATGCTGTG ATTAAGCGTA GAGTTTGTCA TTTTAATGTT CATAATGAGG TGGATGATGA TGATGATGAT GATGAGTTAG TTAAGATGCC TTTATCTCTC TACTCTTGTG AAAGCTTGGT GAACTTACAG CTCTACCGCG TAGTCTTGGA TCATCCCGAA TCTGTTTCCC TGCCCTGTGT CAAGATTGTG CATCTTGATA TGGTCAAGTA CGATGCTGAT TCGACTCTAG AGAGGCTAAT ATCAGGTTGT TCTGTTCTGG AAGAGTTAAC CATAGTTCGT GATCCCAATG ATTCTCTACA AGTTGTGTGT GTGCGTTCCA AGTCTCTAAA AAGCTTCAAG ATAGAGTGTG AGCGCTACGA AAGTAAAAAT CATGTTGTTG AAATCGATGC TCCAAGACTC GAGTATATGA ATCTTTGTGA TCATCGATCT GACAGCTTCA TAATACACAA TATTGGCCCC TTTGCAAAGG TAGATATTGA TGTTATCTTT AATGTGGAAT ATAATGATCC ATTGGAACCA GATGATTCTT CCAAGATAGC TATGCTAGGT AAATTCCTCA CTGGGTTATC TACGGTCAGC GAAATGGTCA TATCTTCTGA TACTCTACAG GTTATTCATG ATTACTGCAA AATGGAACAA CTACCTCAAT TCTCTAACTT GTCTCGCTTG CATGCTTACT TCGAAGATTC TTGGTGGGAA ATGTTGCCAA CCTTCCTTGA GAGCTTCCCA AATCTACACT CACTCGTCAT GGAATTTGAT TGCTTTCCAG ATAAAGAGCA GATTGATCTT TCATCTGTAC CACGATGTTT CATATCATCT CTTGAGTTTG TTCACCTAAA GACACCGTTT GTTGTAAACA TGCAAAAGGA AGGGAGACCA CTCACAGGAA CATCAAGTAA GATGAAATTA GCAAAGTACT TTCTAGAGAA TGGTGCAGCT CTCAAGAAAC TGACAGTAAG TGCGAGTTTC TGTAACATTA TCAACGAAAT CAAATCGATT CCAAGAAGCT CTGCGAGGTG TCAAGTTGTC ATGGATTAAT TGAGCCAGCT TACAAGGTCG T 
Length1401
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6749510.. 6751112
Download Sequence
A.thaliana
AGI-codeAT1G16930.1
DescriptionF-box/RNI-like/FBD-like domains-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
27.0924 Ahg476205 Protein kinase superfamily protein
45.299 Ahg473609 Protein phosphatase 2C family protein
48.6107 Ahg475108 Pentatricopeptide repeat (PPR) superfamily protein
50.2693 Ahg471988 Tetratricopeptide repeat (TPR)-like superfamily protein
51.1859 Ahg938434 Protein phosphatase 2C family protein
67.5278 Ahg473420 heat shock transcription factor A1D
71.1758 Ahg311256 5'-3' exonuclease family protein
77.479 Ahg484148 phytosulfokin receptor 1
87.1321 Ahg487064 Pentatricopeptide repeat (PPR) superfamily protein
88.176 Ahg480677 VPS35 homolog A
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression