Detail



ID : Ahg920739

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920739|scaffold_102020.1
Sequence
GAAAGAATTC TATAAAGCAA ATGGAGAATT TAGGGTTTCT AATAATTTCG ACCTTTTTGC TTATATTTGC AACTCTTCTC CCTTATCCTT CCGCTTCAAC CACCCGTCGA TTTCACTTTA ATGTCGAATG GAAGAAGGTA ACTCGATTGT GCCACACGAA ACAGCTTTTA ACGGTGAACG GACAATATCC AGGGCCGACC GTGGCAGTAC ACGAAGGTGA CACCGTAGAA ATCAAAGTGA CTAACCGGAT TGCTCAAAAT ACAACTATTC ATTGGCATGG GTTAAGGCAA TACCGAACCG GTTGGGCTGA TGGACCGGCT TACATAACAC AATGTCCAAT AAGATCAAAA CAATCATATA CATATAGATT CAAAGTGGAA GATCAAAGAG GCACACTCCT TTGGCATGCT CATCACTCAT GGCAACGAGC CTCCGTCTAT GGCGCTTTCA TCATCTATCC GCGGCAGCCT TATCCCTTTT CCGGCAGTAA TATCCAATCA GAAATCCCCA TTATACTTGG TGAATGGTGG AATGATGACG TGGACATGGT TGAGAAAGAG ATGATGAAGA CCGGAGCTGG GGCTAACGTT TCCGACGCTT ACACCCTTAA CGGGCTTCCC GGCCCACTTT ATCCTTGTTC TACCAAAGAT ACTTTCACGG CGACCGTAGA CGCCGGGAAA ACCTACATCC TCCGTGTAAT CAACGCAGCT CTAAACAACG AGCTCTTCTT GGCTGTAGCG AATCACACAC TAACCGTAGT CGAGGTCGAC GCGGTTTACA CCAAACCGGT TCATACCAAA GCAATCATGA TCGCTCCAGG TCAAACCACC ACCTTTCTTC TCCGCGCCGA CCAACTCTCC GGCGGCGAAT TTATCATCGC CGCAACTCCT TACGTCACTT CCGTCTTCCC CTTCAACAAC TCAACTGCCT TCGGATTCCT CCGATACAGC GGCAGAAGCA AACCGGAAAA TTCCGAAAAT ACACGGCGGA GACGGCGATT AACGGCAATG TCGACAGTCG CAGCTCTTCC GAATATGCTG GATACGAAAT TCGCGACGAA ATTCTCCGAT AGCATCAAGA GTCTCGGATC AGCGGAGTAT CCATGTAAAG TCCCGACGAA GATCGACAAG CGAGTGATCA CCACGATAAG TCTCAATCTC CAGGATTGTC CGCCAAATCA GACCTGCGAC GGCTACGCCG GGAAGAGATT CTTCGCATCA ATGAACAACA TCTCATTCGT CAGACCTCCG ATGTCGATCC TCGAGAGCTA CTATAAGAAA CAGAGTAAAG GAGTTTTCTC GCTCGATTTC CCAGAGAAAC CACCGAACAG ATTCGATTTC ACGGGAGTAG ATCCGGTATC GGAAAACATG AACACCGAAT TCGGGACGAA GCTATTCGAA GTCGAATTCG GATCGAGATT AGAGATCGTG TTTCAAGGAA CGAGTTTCTT AAACATTGAG AACCATCCGT TACATGTACA CGGACACAAT TTCTTCGTAG TGGGAAGAGG ATTTGGGAAT TTTGACCCGG AGATGGATCC GAAAAGGTAC AACTTGGTGG ATCCGCCGGA GAGGAACACC TTTGCGGTGC CGACGGGAGG ATGGGCGGCG ATTAGGATAA ATGCGGATAA TCCAGGAGTT TGGTTTATTC ACTGTCATCT AGAACAACAT ACTTCTTGGG GATTAGCTAT GGGGTTTATC GTTAAAGATG GACCTCTTCC TTCACAAACT CTGCTTCGTC CTCCTCATGA TCTTCCTCAG TGTTAAAAAT GTGTTTTATT ATTATT 
Length1786
Protein Sequence
Protein Residue
Map Locationscaffold_1: 7261130.. 7263588
Download Sequence
A.thaliana
AGI-codeAT1G18140.1
Descriptionlaccase 1
TAIR curator summaryputative laccase, a member of laccase family of genes (with 17 members in Arabidopsis).
Alias[ATLAC1][LAC1][laccase 1]
Gene coexpression
MR
MR Locus Description
3.87298 Ahg942985 Papain family cysteine protease
31.6228 Ahg338071 GRAS family transcription factor
72.4776 Ahg357521 ABC-2 type transporter family protein
73.6885 Ahg486927 cation exchanger 4
77.8075 Ahg473308 F-box associated ubiquitination effector family protein
86.3308 Ahg472691 Galactosyltransferase family protein
93.9787 Ahg329848 nodulin MtN21 /EamA-like transporter family protein
94.3928 Ahg475096 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
95.9166 Ahg486550 Protein of unknown function (DUF1442)
99.0454 Ahg474829 GDSL-like Lipase/Acylhydrolase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression