Detail



ID : Ahg921353

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|921353|scaffold_102634.1
Sequence
AAACTCCGGT GACGTTTGTG AATGGTGGAA ACTAATCCGA TAGGTGATAA TCTTAAGCTC ACCCTTTCAA CAACAAGGGC GAGCTTTTAC ATCATCCCTC TCTCTTCAGA CTCTGTTTTC GCTTTCGGTT CTTGCAAAGA AGGCTGGTAC TTCCGTTGCA TTGGCCTCGA CCCGTGAAAT CATCATCATC ATCATCA 
Length197
Protein Sequence
Protein Residue
Map Locationscaffold_1: 9758723.. 9758919
Download Sequence
A.thaliana
AGI-codeAT1G23149.1
Descriptionconserved peptide upstream open reading frame 29
TAIR curator summaryUpstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF29 represents a conserved upstream opening reading frame relative to major ORF AT1G23150.1
Alias[CPuORF29][conserved peptide upstream open reading frame 29]
Gene coexpression
MR
MR Locus Description
18.8149 Ahg915870 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
26.2107 Ahg942798 gamma vacuolar processing enzyme
29.7489 Virus2846
44.7661 Ahg946744 Thioredoxin superfamily protein
63.8905 Ahg355754
73.6546 Ahg918717 alpha/beta-Hydrolases superfamily protein
85.0999 Ahg494664 phosphate transporter 1;1
94.5516 Ahg931494
97.857 Virus3423
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression