Detail



ID : Ahg921680

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|921680|scaffold_102961.1
Sequence
AGCTTCTAAT CAGAACACAT ATGGAGACTG TCTCTGTTTT GCTCTTCTTC TTCCTCTTCC TTCTTGTGGC AGAAGCCAGG AGTACCTACC GGAGAGGTTG CGACTATTTC ACCTGCGGAG AATTCGACTT CAAGTTCCCT TTCTTTAGCA CAACTATGCC GTCTCGATGC GGTCTTTTCA AGCTGAACTG CAGTGCAAAT GTCTCAGAGA TACAGCTTGT AGAAGATGGG CGATGGTATA AAGTCAAGAG TGTCTCTCAA GCCAACACGA TAACAATCAC CGACCCGAGG CTTAACCAAA GCTTGACAAC CGGAAGCTGC AGTGACTTGT CAAACTTCTC TATTCCAGAT TCGCCATGGC TCAACTTGAC CACTTTGTAC AAATGCAACA ACAGTAGTAG GAAGAATGGT TTCAGCTATG CGAATTGCGG AGGAGAAGGA AGCAGCTTGT ACTACAATTT GGGAGATGAT CATGATGTTT CAGGGTGTTC ACCTATCAAG ACTCCAGAGA GCTGGGTGCC TCCAAGAAAT GGGAACCAGT CTGATGTAAA TGCTACCTTC TCTCTCCATA TAGAACTGCC TGGAGGCTGC TTTCGCTGCC ACAATAACGG TGGAGAATGT AAGATGATCA AAGACAAGTT CCACTGCGAT GGAGGAACCA AAGAACAAAA AGGCTACCAT AAGGAGATGA GGCTAGGATT AGCTATCGGA GGTCCTGTCA TCTTGATAAT CACCTTGGTG GCACTCTTTG CTATCATCCA TAGGAATTAC AGAAGGAAAG ATGGATCAGA GCTCTCTAGA GACAACTCAA AATCTGACGT TGAGTTTAGT CATGTCTTCT TTAAGATACC AATCTTCTCC TATAAAGAAC TTCAAGCAGC AACAGACAAC TTTAGTAAAG ACAGATTACT TGGAGATGGA GGCTTTGGCA CTGTGTATTA TGGAAAAGTG CGTGATGGAC GAGAAGTTGC AGTGAAGCGT CTCTATGAGC ACAATTACAG AAGACTTGAG CAATTTATGA ACGAGATAGA AATCCTCACA CGTCTCCATC ACAAGAATCT AGTCTCCCTC TACGGATGCA CTTCACGCCG TAGCCGAGAG CTTCTCCTTG TCTATGAGTT TATTCCAAAT GGCACAGTTG CAGATCATCT CTATGGTGAA AACACGCCAC ACCAAGGCTA TTTAACATGG TCAATGCGCC TGAACATTGC CATAGAAACA GCGAGTGCAT TGGCTTACCT TCACGCTTCG GATATCATAC ACCGTGATGT CAAGACTACA AACATTCTCC TCGACGGGAA TTTCGGAGTT AAAGTCGCGG ATTTTGGGCT ATCCAGGTTG TTACCGAGTG ATGTAACACA TGTTTCAACT GCTCCTCAGG GTACTCCGGG ATATGTGGAT CCTGAGTATC ATCGGTGTTA TCATCTAACT GATAAAAGTG ACGTGTATAG CTTTGGAGTG GTGCTTGTCG AGCTGATATC CTCGAAGCCT GCTGTTGATA TAAGCAGGTG CAAGAGTGAG ATCAATCTAT CAAGCTTAGC TATAAACAAG ATACAGAACC ACGCGACCCA CGAGCTAATT GATCAGAATC TTGGATATGC AACAAATGAA GGAGTTAGAA AAATGACTAC AATGGTGGCA GAGTTGGCTT TTCAGTGCTT GCAGCAAGAC AGTACAATGA GACCCACAAT GGAACAAGTT GTGCAAGAGC TAAAAGGAAT CCAGAATGAG GAGCAAAAAT GTCATACCAA CGATCACAGA GAGGAGACAA TAACTCTGCA CCCTTCGCCA CCAGATTGGG GTGAGGCTGC ACTATTAAAA AATATGAAAT TCCCACGTTC ACCAATCTCT GTGACTGACC AATGGACAAG TAAATCAACC ACACCGAATA CGAGCGCCTA CGAATTCTAG GATCCACCAG GTATTGGTTT 
Length1930
Protein Sequence
Protein Residue
Map Locationscaffold_1: 11051741.. 11053939
Download Sequence
A.thaliana
AGI-codeAT1G25390.1
DescriptionProtein kinase superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
20.2978 Ahg475116 WRKY family transcription factor
21 Ahg483652 AUTOPHAGY 8E
21.0713 Ahg481938 WRKY DNA-binding protein 25
26.4953 Ahg475187 S-locus lectin protein kinase family protein
27.4226 Ahg327739 RING-H2 finger B1A
28 Ahg925763 CYS, MET, PRO, and GLY protein 1
32.187 Ahg476011 related to ABI3/VP1 2
34.9857 Ahg484026 phosphatidic acid phosphatase 1
36.2767 Ahg918888 Chitinase family protein
39.3954 Ahg945175 Ypt/Rab-GAP domain of gyp1p superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression