| Annotation |
|---|
| Description | jgi|Araly1|922639|scaffold_103920.1 |
| Sequence |
TTGATCCAGC CGGAGAAATC AATGGAAAGT GAAGCGATCC AAGAGGAGCT TCAGAATTTA GACGTCGAGT TAAAAGATGT TCAAGGTCAG ATAAGTGCTT TGATTGAGCA TCAAGATAGA TTATACGAGA GGAAGTCTGA GTTAAAGACA TTGTTGAAAG CATTAGCTAC ATCAGGAAGT CCTGTTGCAT CTAGTGGCTC TAATGCTATA GAGAATTGGT CTGAGGCATT TGAGTGGGAT TCTCGGGCTG ACGATGTTCG GTTCAACGTT TTTGGTATAT CCAAGTATAG GGCTAACCAG AAGGAAATTA TTAACGCTAT AATGGCGGGA AGAGATGTTC TGGTGATCAT GGCAGCTGGT GGTGGGAAGA GTCTTTGCTA CCAACTTCCC GCTATACTTC GTGGTGGGAC AACTCTTGTT GTCAGTCCTT TACTTTCACT GATTCAGGAT CAGGTTATGG GATTGGCTGC TCTAGGAATT TCAGCATACA TGCTTACTTC TACTTCTGGC AAGGAAAATG AGAAATTTGT GTACAAGGCA CTTGAAAAGG GTGAAGATGA CCTCAAGATA CTTTATGTAA CACCAGAGAA GGTATCAAAG AGCAAAAGAT TCATGTCGAA GCTTGAAAAG TGTCACAATG CTGGTCGCCT CTCTCTTATA TCAATTGATG AGGCTCATTG TTGTAGTCAG TGGGGTCATG ATTTTCGCCC TGATTACAAG AACTTAAGCA TTCTGAAAAC CCAGTTTCCC AAAGTTCCCA TGGTGGCTTT AACTGCAACT GCTACACAGA AAGTTCAAAA TGATCTGATA GAGATGCTGC ATATTCCTAA ATGCGTCAAA TTTGTTAGCA GTGTTAACAG GCCAAATCTC TTTTACTCGG TCCGAGAAAA GTCGGCAGTT GGTAAAGTGG TGGTTGATGA AATTGCAGAA TTCATACGGG AATCATACTT TAACAATGAA TCTGGAATAG TCTATTGTTT CTCCCGGAAG GAGTGTGAAC AGATTGCAGG TGAATTACGA GAGAGAGGGA TTTCTGCTGA TTATTACCAC GCAGACATGG ATGCAAATAT GCGCGAAAAA GTTCATATGC GATGGAGCAA GAACAAGTTG CAGGTCATTG TTGGAACAGT TGCCTTTGGC ATGGGAATCA ACAAGCCTGA TGTCAGATTT GTCATCCACC ACAGTTTGAG CAAATCAATG GAGACTTACT ACCAGGAGAG TGGCCGCGCT GGTCGTGATG GCCTCCCATC CGAGTGCATC CTCTTTTTTC GTTCGGCTGA TGTTCCCAGG CAGAGTTCCA TGGTCTTCTA CGAGTATTCT GGTCTGCAAA ATCTCTACGA TATAGTAAGA TATTGTCAGT CTAAAACAAA ATGTCGTCGA AGCGCATTTT TTCGTCATTT TGGGGAACCA TCCCAAGATT GCAATGGAAT ATGTGACAAC TGTGCCTTAT CAAGTGAGGT AAAGGAAGTT GATGTATCGG ACCTGTCTAA GCTCGTGGTT TCTATGGTGC AAGAAACGCA AGCCAAGGAT CAAAGAGTGA CAATGTTACA GTTGGGTGAC AAACTCAGAA ATAAGCACAA GGATCTAAGT GCTGAGTTAA AGAGAGACGA GATAGAACAT CTCGTGATAA AACTGATTGT TGACTCAGTA TTGAAAGAAG AATTCCAGCA CACACCATAC TCGACAAATG CTTATGTAAC AATGGGACCA TTGGCCAACC AATTGTTGCA AGGAAGAAAG ACGATCAAAA TGGAAACCTC TAGCAGGCAA ACCAAGAAAC CGAAAAGAAG TCTTTCATTT TCCGGGTTGG AACTCAAGCT TGACGAGCTA CGTAAAGAGA TATCCGCAGC TGATGGAAGC ATACTCCCTC ACACGGTTCT CTCAACTCAG CAGATTAGCT TGATAAGTTC CCAAAAACCA GTTTCATTAC AAGAGTTGGA GAGTATTATA GGAAAACTGA AAACAGAAAA GTATGGAGAC AGGATTCTAG AAGAAGTGAC GAGACACGAA GTAGTGTCTG AACAACTTGT TGAAGATCCA ACAAAGGAAG AGACATGTAA AAGCAGATCA AGAAAGAGAG CTAAGACACA GAAGGATGCT ATATTGGTAG AGAGCAGTGG AGAAGAAGAA GCTTGATGAA TCAATTATCT TCTAATT |
| Length | 2157 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 15865899.. 15870637 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G31360.1 |
| Description | RECQ helicase L2 |
| TAIR curator summary | Encodes a (d)NTP-dependent 3'->5' DNA helicase. This protein can also disrupt D loop structures and may mediate branch migration of Holliday junctions when tested in vitro. The unwinding activity of the enzyme depends on the presence of divalent cations (Mg2+, Mn2+, or Ca2+, but not Zn2+).(d)NTPs are also required with ATP and dATP supporting the greatest amount of DNA unwinding in vitro. |
| Alias | [ATRECQ2][MED34][RECQL2][ARABIDOPSIS THALIANA RECQ 2][RECQ helicase L2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.77496 |
Ahg350399 | pentatricopeptide (PPR) repeat-containing protein |
| 11.4891 |
Ahg317584 | SMAD/FHA domain-containing protein |
| 19.2094 |
Ahg489043 | Ubiquitin carboxyl-terminal hydrolase family protein |
| 55.0454 |
Ahg490537 | Putative membrane lipoprotein |
| 70.2851 |
Ahg490687 | Homeodomain-like superfamily protein |
| 82.7647 |
Ahg477641 | Protein of unknown function (DUF1639) |
| 86.0581 |
Ahg940606 | Pentatricopeptide repeat (PPR) superfamily protein |
| 92.5635 |
Ahg919570 | DNA polymerase epsilon catalytic subunit |
| 97.8724 |
Ahg337332 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| 99.0454 |
Ahg946315 | receptor like protein 51 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|