Detail



ID : Ahg923594

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|923594|scaffold_104875.1
Sequence
TGATTCCAAA AAAAAAAGGG AAATGAATTC TAACAACTGG CTTGCTTTTC CTCTATCACC AACTCACTCT TCTTTGCCTC CTCACATTCA CTCTTCACAA ACTTCTCATT TCAATCTAGG TTTGGTCAAC GACAATATCG ACAACCCTTT TCAAAACCAA GAATGGAATA TGATCAATCC ACACGGTGGA GGCGGCGAAG GTGGAGAGGT TCCAAAAGTG GCTGATTTCT TAGGAGTGAG CAAATCGGGG GATCATCATC CCGACCACAA CCTCGTACCT TACAACGACA TTCATCAAAC CAACGACTCA GACTACTACT TCCAAACCAA TAGCTTGTTA CCTACAGTCG TCACTTGTGC CTCTAATGCT CCTAATAACT ATGAGCTTCA AGAGAGTGCT CACAATTTGC AATCTCTCAC TCTTTCTATG GGAAGTACTG GAGCTGCCGC TGCCGAAGCT GACACCGTGA AAGCCTCGCC GGCTGAGACT AGCGCCGATA ATAGTAGTAG CACTACCAAC ACAAGTGGAG GAGCCATCGT TGAGGCTACA CCGAGACGGA CTTTGGAAAC TTTTGGACAA CGAACCTCTA TCTATCGTGG AGTTACAAGA CATAGATGGA CCGGTAGATA TGAAGCTCAT CTTTGGGATA ATAGCTGTAG AAGAGAAGGA CAATCAAGGA AAGGAAGACA AGTCTACTTA GGTGGGTATG ACAAAGAAGA GAAAGCAGCC AGAGCATATG ATCTAGCTGC ACTTAAATAT TGGGGTCCCT CTACTACTAC CAACTTTCCG ATAACTAATT ACGAGAAGGA AGTAGAGGAG ATGAAAAACA TGACGAGACA AGAGTTTGTG GCTTCTATAA GAAGGAAAAG TAGCGGATTC TCGCGTGGTG CATCGATGTA TCGTGGAGTA ACAAGGCATC ATCAACATGG AAGATGGCAA GCAAGGATTG GCCGAGTTGC TGGAAACAAA GATCTATACT TGGGAACATT CAGCACGGAG GAAGAAGCAG CAGAAGCTTA TGATATAGCT GCGATAAAGT TTCGAGGTCT AAACGCGGTT ACAAACTTTG AGATAAACCG TTACGACGTG AAAGCTATCC TAGAGAGCAA CACACTTCCT ATAGGAGGTG GTGCGGCTAA ACGGCTCAAA GAAGCTCAAG CTCTAGAATC ATCGAGAAAA CGCGAGGAAA TGATAGCCCT CGGATCAAAT TTCCATCAGT ATGGTGCAGC GAGCGGCTCG AGCTCTGTTG CTTCCAGCTC TAGGCTTCAG CTTCAACCAT ACCCACTAAG CATTCAACAA CCTTTTGAGC ATCTTCATCA TCATCAGCCT TTACTTACTC TACAGAACAA CAACGATATC TCTCAGTATC ATGATTCCTA TAGTTACATT CAGACGCAGC TTCATCTTCA CCAACAACAA ACCAACAATT ACTTGCAGTC TTCTAGTCAC AGCACACAGC TCTACAATGC TTATCTTCAG AGCAACCCTG GTTTGCTTCA TGGCTTTATC TCTGATAACA ACAACACTTC AGGGTTTCTT GGAAACAATG GGATTGGTAT TGGCTCAACC TCGACCGTTG GATCATCGGC TGAGGAAGAG TTTCCGGCTG TGAAAGTAGA TTACGATATG CCTCCTTCCG GTGGAGCTAC AGGGTACGGA GGATGGAATA CCGGAGAGTC TGTTCAAGGA ATGAATCCAG GAGGTGTTTT CACGATGTGG AATGAATAAA AGATGATATT TCTGTGTTT 
Length1749
Protein Sequence
Protein Residue
Map Locationscaffold_1: 25707907.. 25710674
Download Sequence
A.thaliana
AGI-codeAT1G51190.1
DescriptionIntegrase-type DNA-binding superfamily protein
TAIR curator summaryEncodes a member of the AINTEGUMENTA-like (AIL) subclass of the AP2/EREBP family of transcription factors and is essential for quiescent center (QC) specification and stem cell activity. It is a key effector for establishment of the stem cell niche during embryonic pattern formation. It is transcribed in response to auxin accumulation and is dependent on auxin response transcription factors.
Alias[PLT2][PLETHORA 2]
Gene coexpression
MR
MR Locus Description
6.7082 Ahg936560 Galactose oxidase/kelch repeat superfamily protein
26.0192 Ahg923256
40.9145 Ahg479996 Uncharacterised conserved protein UCP015417, vWA
42.0833 Ahg914791
56.9122 Ahg946251 proline-rich family protein
59.127 Ahg947612
60.5475 Ahg924544
65.8179 Ahg915127 xyloglucan endotransglucosylase/hydrolase 2
73.4847 Ahg352197
84.214 Ahg481945 LOB domain-containing protein 13
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression