Detail



ID : Ahg479996

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479996|fgenesh2_kg.3__2697__AT3G24780.1
Sequence
ATGGCTTCTC AGTTCCCTGG TCCACACGAG ATCCAAGACT CCAACGCTCC CCTCACAGCT TCTGGTCCCA GCAATCCAGT CAATACTTCA CCTCCGATGG GACAGACCGA GGAAAGACCC CCCACGTACC TCGCCGCTCT CCTCAAAAAC ATCAACACTT GTCGTCCCAG CGTCCCAAAG GTCTCAAACG TCAAGAAATC AACTAAAGTC AACGTCAATC CTGTTAGACC GGTTCGACCT GTTAGGCCGG TTCGGCCTGT TAGACCGGTT AGACCTGTTA GACCGGTTAG ACCTGTTAGA CGGCGAAAAG TAGATTTAAA CATATCTTCA CCTGCGATGG GCTACACCGA GAATAGATCC GCCACGTACC TCTCCTCAGG CAACCCCTGT CTCGACTTCT TCTTTCACGT TGTTCCTTCC ACGCCCAAGA AATCTCTGGA GCAGCGGCTA AAGGAGGCTT GGGACCATGA TTCTTTAACC ACTCTCAAGC TTATCTGTAA CCTTCGAGGA GTCCGTGGCA CTGGAAAATC TGACAAGGAA GGGTTTTACA CGGCGGCGTT GTGGCTCCAT AGTCGCCATC CGAAAACCCT AGCTTGTAAC CTCGAGTCCA TCTCCAAGTT TGGCTATTTT AAAGATTTTC AAGAGATTCT TTACCGGATT CTACAAGGAT CTGAAATCCG CAGTATCCAG AAATCGGAAT GGTACAAGAC AATAGCCGCA GCAATTCTTC GTAGAAGATC CAAATTCTCG AGAGGCGGTC GTGGTGTTGG CCGTGGTTTT GGTCGTGGTC GTGGAAGGGG TCGCGGAATG GTTCGTCGTG GTCTTAAAAG GCCGGCAGCC ACGAGGGAGC TGAGGGTAGC GAACGCGGAG AGGAAGAACC AAGAGGAGAA AGCCAGAGCA AGCTTGAAGC GCAAGCAAAA GAAGGTTTCA TTGGGGAAGG CCGCATCTAC AAGGTATTCT AACGATCCAA AATATAGGTT CCTCCACGAA CGTGTCTCTG ATCTATTCGC AAATCAACTA AGGAGAGACC TTGAGTTTTT GACATCCGGC CAACCAAATA AAATCTCTCT AGCGGCTAAA TGGTGTCCAT CCCTTGATTC TTCGTTCGAC AAAGCAACTC TGCTCTGCGA GAGCATTGCT AGGAAGATCT TTCCCCAAGA ATCATTCCCG GAATACGAAG GCGTGGAAGA TGCTCACTAT GCGTACAGAG TTCGTGATCG GCTAAGGAAA CAAGTTCTTG TTCCCCTCCG GAAGACTCTG CAACTCCCTG AAGTATACAT GGGAGCTAGA GCTTGGCGAT CTCTCCCTTA CAACCGTGTT GCATCAGTGG CGATGAAGTC GTACAAAGAA ATTTTCTTGT ACCGTGACGC AGAGAGGTTT CAGCAATATC TTAAAGATGC GAGGATGGGG AAAACGAAGA TAGCCGCGGG TGCTGTGTTA CCTCACGAGA TAATCAGAGA ATTAGACGGC GGAGACGGTG GACAAGTCGC TGAGCTGCAA TGGAAACGAA TGGTTGATGA TCTTAAAAAG AAAGGTTCTT TGACCAACTG CATGGCTATC TGTGACGTTT CGGGGTCTAT GGAAGGTGAG CCAATGGAGG TTTCAGTCGC ACTTGGTTTG CTAGTCTCTG AGTTATCAGA AGAGCCATGG AAAGGAAAGC TTATAACATT CAGCAAAAAC CCTGAATTGC ATTTGGTGAA AGGAGACGAT TTGAGATCAA AAACAAGTTT CGTGGAGAAT ATGGAATGGG ATATGAACAC TGATTTTCAG AAAGTGTTTG ATTTGATTCT TAAAGTGGCC GTAGAAGGGA AGCTGAAGCC AGAAGAGATG ATCAAGAGGG TGTTTGTGTT CAGTGACATG GAGTTTGATC AAGCGTCGAC TCCGTATAAT GGATGGGGAA GACCGCCTCC GAGTAATGGA TGGGATACAG ATTATGAGGT GATTGTGAGC AAGTACAAAG AGAAAGGGTA CGGAGAAGCT GTGCCGCAGA TAGTGTTTTG GAACCTGAGG GATTCGAGGT CAACGCCTGT GCTTGGAAAC AAGAAAGGAG TGGCTTTGGT AAGTGGGTTT TCGAAGAATT TGATGAAAAT GTTCTTGGAT CACGATGGAG AGATTGATCC CATTACGATC ATGAAGGCTG CTATATCTAG AGATGAATTT TGTGAGCATT GTAACATTTG GTTGAATCTT TGA 
Length2193
Protein Sequence
Protein Residue
Map Locationscaffold_3: 11493939.. 11496170
Download Sequence
A.thaliana
AGI-codeAT3G24780.1
DescriptionUncharacterised conserved protein UCP015417, vWA
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.6619 Ahg906745 polyol/monosaccharide transporter 2
13.6748 Ahg947612
14.8324 Ahg900866
17.088 Ahg914084
18.0831 Ahg931060
28.4956 Ahg946012 Zinc finger, C3HC4 type (RING finger) family protein
30.8545 Ahg896008 pectin methylesterase 38
32.249 Ahg924070 SKU5 similar 12
35.327 Ahg940633 Major facilitator superfamily protein
40.9145 Ahg923594 Integrase-type DNA-binding superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression