Detail



ID : Ahg923664

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|923664|scaffold_104945.1
Sequence
GATCTGAATT TTGTGTACAA GATGTCGAGA TTCAGAGACA GGACAGAGGA TTTCAAGGAT TCTGTTCGAA AATCGGCTGT TTCGATTGGT TATAATGAGT CTAAAGTGGC ATCGACAATG GCGTCTTTTA TTATACATAA GCCAAAGGAG AGATCGCCTT TCACGAAAGC TGCTTTCAAA ACGCTGGATA GCATCAAGGA GTTGGAACAG TTTATGTTGA AGCATCGGAA GGATTATGTT GATCTGCACC GGACTACTGA ACAGGAAAAG GATAGCATTG AACAAGAAAT TACTGCTTTT ATTAAAGCTT GCAAAGAACA GATCGATATT CTCAAAAACA GTATTAGAAA TGAAGAAGCA AACTCTAAAG GATGGCTTGG CCTTCCCGCA GATAACTTCA ATGCTGATAC TATAGCACAC AAACATGGAG TGGTTTTGAT TCTGAGTGAG AAACTTCATT CAGTCACTGC CCAGTTTGAT CAGCTTAGAG CTACTCGTTT CCAAGATATT ATTAACAGAG CTATGCCAAG AAGAAAACCT AAGAGGATCA TAAAGGAAGC TAATCCAATC ATCACAACTC TGGCAAATTC GGAGTCCATA AAACCGGGTG AAATTCAGGC CCAACCTCGT AGAGTACAAC AACAACAACT TCTAGACGAT GAAACACAAG CCCTTCAGGT AGAGCTAAGT AATCTTTTAG ATGGTGCTAG GCAGACAGAG ACTAAGATGG TGGAGATGTC TGCATTGAAC CACTTGATGG CAACTCATGT TCTTCAACAA GCCCAACAGA TAGAGTTTCT TTATGACCAG GCGGTTGAGG CAACAAAGAA CGTGGAGCTT GGAAACAAAG AGCTTTCTCA AGCAATCCAA CGAAACAGCA GCAGCAGAAC CTTTCTCTTA CTGTTTTTCT TCGTCCTTAC TTTCTCCGTT TTGTTCTTGG ATTGGTACAG TTAAGAGACC ATTCTCCAAC AACA 
Length974
Protein Sequence
Protein Residue
Map Locationscaffold_1: 26019239.. 26021380
Download Sequence
A.thaliana
AGI-codeAT1G51740.1
Descriptionsyntaxin of plants 81
TAIR curator summarymember of SYP8 Gene Family
Alias[ATSYP81][ATUFE1][SYP81][UFE1][ARABIDOPSIS THALIANA ORTHOLOG OF YEAST UFE1 (UNKNOWN FUNCTION-ESSENTIAL 1)][syntaxin of plants 81][ORTHOLOG OF YEAST UFE1 (UNKNOWN FUNCTION-ESSENTIAL 1)]
Gene coexpression
MR
MR Locus Description
25.04 Ahg923452
35.8748 Ahg339050 RING/FYVE/PHD zinc finger superfamily protein
36.6742 Ahg339498 nuclear factor Y, subunit A3
42.9884 Ahg923419 RING/U-box superfamily protein
44 Ahg928719 Calcium-binding EF-hand family protein
47.3709 Ahg935078 zinc finger (ubiquitin-hydrolase) domain-containing protein
55.7225 Ahg928539 Protein of unknown function, DUF538
57.1839 Ahg484824 dicer-like 3
61.7738 Ahg496698 Ras-related small GTP-binding family protein
68.4105 Ahg491703 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression