| Annotation |
|---|
| Description | jgi|Araly1|923786|scaffold_105067.1 |
| Sequence |
ACCATTCACC GTCGTCTGTA ATGTCTAAAA CCCTTCTCTC TCGCATCAAA CCTCTCACCA ATCCTCCTCC ATCTAATTCC TTCCGATCTC ATTTTCCGAT CACTCCCCGT ATCAAGAAAC TAGTCAGCGA CACTGTTTCC ATCCTCAAAA CCCAACAAAA CTGGTCTCAA ATTCTCGACG ATTGCTTCGC TGATGAAGAA GTACGCTTCG TCGACATTTC CCCTTTCGTA TTCGATCGAA TCCAGGACGT CGAAATTGGC GTTAAACTGT TTGATTGGCT TTCGAGTGAG AAGAAAGATG AGTTCTTTTC AAATGGGTTT GCTTGTTCTT CGTTTCTGAA GCTTTTAGCG AGGCATAGGA TCTTCAATGA GATTGAAGAT GTGCTGGGTA ATCTCAGAAA CGAAAATGTG AAGCTTACAC ATGAAGCGTT GAGTCATGTT CTTCACGCTT ATGCTGAATC AGGGTTTTTA AGTAAAGCAG TGGAGATTTA TGATTATGTT GTTGAGTTAT ATAATTCTGT GCCTGATGTT ATTGCTTGTA ACTCGTTGTT GAGTTTAGTA GTGAAAAGTA GGAGACTTGA AGATGCACGG AAGGTGTATG ACGAAATGTG TGAGAGAGGT GGCTGTGTTG ATAATTACAG TACTTGTATA TTGGTCAAGG GTATGTGTAG TGAAGGTAAG GTAGAAGAAG GTAGAAAGTT GATTGAAGAT CGATGGGGTA AAGGTTGTGT TCCGAATATT GTGTTTTACA ACACAATTAT TGGTGGATAC TGCAAGCTGG GCGATATCGA AAATGCGAAA CTAGTTTTTA AGGAGTTGAA GTTGAAGGGA TTTATGCCGA CTTTGGAAAC TTTTGGTACA ATGATTAACG GGTTCTGCAA GAAAGGGGAT TTCGTGGCGA GTGATCGACT TTTGAAGGAA GTGAAAGAAA GGGGTTTAAG GGTTTGTGTT TGGTTCCTTA ATAACATCAT TGATGCTAAG TATAGGCACG GTTTTAAGGT TGACCCAGCT GAAAGCATAC GATGGATAGT AGCTAATGAT TGCAAGCCGG ATATAGCAAC ATATAACATT TTGATTAATC GTTTGTGTAG AGAAGGGAAA AAGGAAGATG CTGCTGGGCT TTTGGATGAA GCATCGAAGA AAGGGTTGAT TCCGAGCAAT TTAAGCTATG CCCCTCTAAT ACTAGCCTAT TGCAAAAGTA AAGAGTATGA TATTGCATCT AAGTTGCTTC TACAGATGGC TGAAAGAGGA TGCAAACCAG ATATAGTTAC ATATGGAATT CTTATCCATG GTCTTGTTGT TTCAGGCCAT ATGGATGATG CAGTTAATAT GAAAGTTAAA TTGATAGATA GAGGAGTTTC ACCGGATGCC GCCATCTACA ATATGTTGAT GAGTGGATTG TGCAAGACCG GTAGGTTTTT ACCTGCCAAA CTCCTCTTCT CGGAGATGCT AGACCGGAAT ATCTTACCAG ATGCTTATGT GTATGCCACG CTCATTGATG GATTCATCAG AAGTGGTGAT TTTGATGAGG CACGGAAAGT TTTCACTCTC TCAGTTGAAA AGGGTGTCAA GGTTGATGTC GTGCACCACA ATGCTATGAT AAAGGGGTTT TGCAGATCTG GAATGTTGGA TGAGGCATTG GCGTGCATGA ACAGGATGAA TGAAGAACAC CTTGTACCCG ACAAGTTTAC TTATTCCACA ATCATCGACG GATATGTAAA ACAACAGGAT ATGGCTACTG CCATTAAGAT TTTTCGAGAC ATGGAGAAGA ATAAATGTAA GCCAAACGTC GTAACATACA CTTCACTTAT CAATGGTTTT TGTTGCCAAG GGGACTTCAG TTTGGCTGAA GAGACTTTCA AAGAGATGCA ATCGCGTGAC CTTGTGCCTA ACGTTGTCAC CTACACAACA CTTATACGGA GTTTTGCTAA AGAGAGTAGT ACCCTTGAAA AAGCAGTTTA CTATTGGGAG CTAATGATGA CAAACAAATG TGTTCCTAAT GAAGTTACCT TCAATTGTTT ACTTCAGGGA TTTGTGAAAA AAACATCTGG AAGATTTCTT GGTGAACCGG ATGGTTTTAA TCATGGACAA AGTTTTCTGT TTTTTGAGTT TTTCCATAGA ATGAAATCAG ATGGGTGGTC GGACCACGCT GCTGCTTACA ATTCTGTCCT TGTTTGTCTC TGTGTACATG GAATGGTGAA GACCGCATGC ATGTTTCAGG ATAGGATGAT GAAGAAAGGC TTCTCTCCTG ATCCTGTTTC ATTTGCTGCT ATTTTACATG GTTTTTGTGT GGTTGGGAAC TCAAAGCAAT GGAGAAACAT GGACTTTCGT AATCTGGATG AAAAGGGTCT TGAGGTAGCT GTTAGGTATT CGCGGGTTTT AGAGCAACAC TTACCTAAAG CAGTGATATG CGAGGCTTCA ACTATTTTGC ATGCAATGGT TGAAAAAGCT GACACCAAAG AACCGGAGAT CTGTAGAATT TCCGTAAGGT AAAAGACAGA TTATTTGCTG CT |
| Length | 2512 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 26684415.. 26686926 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G52620.1 |
| Description | Pentatricopeptide repeat (PPR) superfamily protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 13.2288 |
Ahg487743 | Vacuolar sorting protein 9 (VPS9) domain |
| 26.5518 |
Ahg943479 | translocon at the outer envelope membrane of chloroplasts 159 |
| 56.6922 |
Ahg898458 | Cleavage and polyadenylation specificity factor (CPSF) A subunit protein |
| 57.4717 |
Ahg470983 | |
| 63.561 |
Ahg477808 | nucleotide repair protein, putative |
| 82.6136 |
Ahg893682 | like heterochromatin protein (LHP1) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|